RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ATP2A1O14983 1001 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 PLA2G6O60733 806 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 SLC25A27O95847 323 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 GJB1P08034 283 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 FCER1AP12319 257 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 MLLT1Q03111 559 aaPredicted RBP15.92■□□□□ 0.14
SNF8-206ENST00000509989 ADCK5Q3MIX3 580 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 PPP4R3BQ5MIZ7 849 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 DPP9Q86TI2 863 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 NCOA7Q8NI08 942 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 IGDCC4Q8TDY8 1250 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 U2AF1L4Q8WU68 220 aaKnown RBP15.92■□□□□ 0.14
SNF8-206ENST00000509989 TCEANC2Q96MN5 208 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 RANBP17Q9H2T7 1088 aaKnown RBP15.92■□□□□ 0.14
SNF8-206ENST00000509989 KAT14Q9H8E8 782 aa15.92■□□□□ 0.14
SNF8-206ENST00000509989 IFIT3O14879 490 aaKnown RBP15.91■□□□□ 0.14
SNF8-206ENST00000509989 STRNO43815 780 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 ALAS1P13196 640 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 GJA8P48165 433 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 MNX1P50219 401 aaPredicted RBP15.91■□□□□ 0.14
SNF8-206ENST00000509989 ZNF792Q3KQV3 632 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 DIS3LQ8TF46 1054 aaKnown RBP15.91■□□□□ 0.14
SNF8-206ENST00000509989 MAML3Q96JK9 1138 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 UBAC1Q9BSL1 405 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 MYL10Q9BUA6 226 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 ASTN1O14525 1302 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 RPTORQ8N122 1335 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 LRRC37A2A6NM11 1700 aa15.91■□□□□ 0.14
SNF8-206ENST00000509989 DNAJC25-GNG10A0A024R161 153 aa15.9■□□□□ 0.14
SNF8-206ENST00000509989 SGPL1O95470 568 aa15.9■□□□□ 0.14
SNF8-206ENST00000509989 CPA1P15085 419 aa15.9■□□□□ 0.14
SNF8-206ENST00000509989 CNTN2Q02246 1040 aa15.9■□□□□ 0.14
SNF8-206ENST00000509989 IFIT1BQ5T764 474 aaKnown RBP15.9■□□□□ 0.14
SNF8-206ENST00000509989 ANO1Q5XXA6 986 aa15.9■□□□□ 0.14
SNF8-206ENST00000509989 RAB11FIP4Q86YS3 637 aa15.9■□□□□ 0.14
SNF8-206ENST00000509989 RNF146Q9NTX7 359 aa15.9■□□□□ 0.14
SNF8-206ENST00000509989 PRC1O43663 620 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 TRDNQ13061 729 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 LHX8Q68G74 356 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 RALYLQ86SE5 291 aaKnown RBP15.89■□□□□ 0.13
SNF8-206ENST00000509989 ABRAQ8N0Z2 381 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 TRERF1Q96PN7 1200 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 CRISPLD2Q9H0B8 497 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 LY9Q9HBG7 655 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 VAT1LQ9HCJ6 419 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 HMX1Q9NP08 348 aaPredicted RBP15.89■□□□□ 0.13
SNF8-206ENST00000509989 A1CFQ9NQ94 594 aaKnown RBP15.89■□□□□ 0.13
SNF8-206ENST00000509989 PCDH10Q9P2E7 1040 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 MAD2L2Q9UI95 211 aa15.89■□□□□ 0.13
SNF8-206ENST00000509989 CTDP1Q9Y5B0 961 aaPredicted RBP15.89■□□□□ 0.13
SNF8-206ENST00000509989 SOWAHBA6NEL2 793 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 NFIBO00712 420 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 CYBAP13498 195 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 RXRAP19793 462 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 OAZ1P54368 228 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 KCTD2Q14681 263 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 TMEM67Q5HYA8 995 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 UBE2Q1Q7Z7E8 422 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 ADGRF4Q8IZF3 695 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 TBC1D5Q92609 795 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 JMJD4Q9H9V9 463 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 CCPG1Q9ULG6 757 aa15.88■□□□□ 0.13
SNF8-206ENST00000509989 SH2B2O14492 632 aaPredicted RBP15.87■□□□□ 0.13
SNF8-206ENST00000509989 PPP1R11O60927 126 aaPredicted RBP15.87■□□□□ 0.13
SNF8-206ENST00000509989 SNAI1O95863 264 aaPredicted RBP15.87■□□□□ 0.13
SNF8-206ENST00000509989 ICAM1P05362 532 aa15.87■□□□□ 0.13
SNF8-206ENST00000509989 TROAPQ12815 778 aa15.87■□□□□ 0.13
SNF8-206ENST00000509989 GRM4Q14833 912 aa15.87■□□□□ 0.13
SNF8-206ENST00000509989 WTAPQ15007 396 aa15.87■□□□□ 0.13
SNF8-206ENST00000509989 CCDC178Q5BJE1 867 aa15.87■□□□□ 0.13
SNF8-206ENST00000509989 OLFML2BQ68BL8 750 aa15.87■□□□□ 0.13
SNF8-206ENST00000509989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.87■□□□□ 0.13
SNF8-206ENST00000509989 CLEC4DQ8WXI8 215 aa15.87■□□□□ 0.13
SNF8-206ENST00000509989 LENG1Q96BZ8 264 aaPredicted RBP15.87■□□□□ 0.13
SNF8-206ENST00000509989 PALM3A6NDB9 673 aaPredicted RBP15.86■□□□□ 0.13
SNF8-206ENST00000509989 CYTH3O43739 400 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 TFRCP02786 760 aaKnown RBP15.86■□□□□ 0.13
SNF8-206ENST00000509989 PARP1P09874 1014 aaKnown RBP15.86■□□□□ 0.13
SNF8-206ENST00000509989 PTGS1P23219 599 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 CDC37Q16543 378 aaPredicted RBP15.86■□□□□ 0.13
SNF8-206ENST00000509989 USH1GQ495M9 461 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 MFSD14CQ5VZR4 134 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 TRMT44Q8IYL2 757 aaKnown RBP15.86■□□□□ 0.13
SNF8-206ENST00000509989 ANKRD35Q8N283 1001 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 CHST13Q8NET6 341 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 DDX11Q96FC9 970 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 TINF2Q9BSI4 451 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 ACAD9Q9H845 621 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 SNX14Q9Y5W7 946 aa15.86■□□□□ 0.13
SNF8-206ENST00000509989 KLRF2D3W0D1 207 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 ADCY6O43306 1168 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 FDX1P10109 184 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 CNGA1P29973 690 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 NT5C2P49902 561 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
SNF8-206ENST00000509989 EXOSC10Q01780 885 aaKnown RBP15.85■□□□□ 0.13
SNF8-206ENST00000509989 QRICH1Q2TAL8 776 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 ASPRV1Q53RT3 343 aa15.85■□□□□ 0.13
SNF8-206ENST00000509989 GPATCH4Q5T3I0 446 aaKnown RBP15.85■□□□□ 0.13
SNF8-206ENST00000509989 CASC1Q6TDU7 716 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms