RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 TRIM43BA6NCK2 446 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 IQCA1LA6NCM1 817 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 C5orf60A6NFR6 353 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 BTBD19C9JJ37 291 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 SNPHO15079 494 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 STX6O43752 255 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 WFS1O76024 890 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 PORP16435 677 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 GUCY1B3Q02153 619 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 ITGA7Q13683 1181 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 SAFBQ15424 915 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 CEP128Q6ZU80 1094 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 THEMISQ8N1K5 641 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 MIS12Q9H081 205 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 ATP8A2Q9NTI2 1148 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 IL20Q9NYY1 176 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 NOS1P29475 1434 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 ADGRL1O94910 1474 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 CLTAP09496 248 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 CCNCP24863 283 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 SPCS2Q15005 226 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 ADRM1Q16186 407 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 COBLL1Q53SF7 1204 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 RNF187Q5TA31 235 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 EHBP1Q8NDI1 1231 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 DQX1Q8TE96 717 aaKnown RBP11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 WDR60Q8WVS4 1066 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 DHX58Q96C10 678 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 OSBPL7Q9BZF2 842 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 PIDD1Q9HB75 910 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 IFT122Q9HBG6 1241 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 COMMD3-BMI1R4GMX3 469 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 ABCC3O15438 1527 aa11.95□□□□□ -0.5
PDLIM5-210ENST00000508216 KAT6BQ8WYB5 2073 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 APAF1O14727 1248 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 HOXB3P14651 431 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 VARSP26640 1264 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 LSP1P33241 339 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 MTTPP55157 894 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 APBA1Q02410 837 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 DMPKQ09013 629 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 SPECC1Q5M775 1068 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 TTC22Q5TAA0 569 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 DAB2IPQ5VWQ8 1189 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 MSL1Q68DK7 614 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 OR52E8Q6IFG1 317 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 ANO7Q6IWH7 933 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 STK11IPQ8N1F8 1099 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 SCAIQ8N9R8 606 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 LINS1Q8NG48 757 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 MYCBPAPQ8TBZ2 947 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 PTCD2Q8WV60 388 aaKnown RBP11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 PTPRN2Q92932 1015 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 CATSPER2Q96P56 530 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 CCT7Q99832 543 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 C2orf49Q9BVC5 232 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 TIPINQ9BVW5 301 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 SUGCTQ9HAC7 445 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 INIPQ9NRY2 104 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 SCHIP1Q9P0W5 487 aaPredicted RBP11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 KIAA1468Q9P260 1216 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 PCSK1NQ9UHG2 260 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 FADS3Q9Y5Q0 445 aa11.94□□□□□ -0.5
PDLIM5-210ENST00000508216 ASXL1Q8IXJ9 1541 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 DNM1LO00429 736 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 NDUFB5O43674 189 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 FGFR1OPO95684 399 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 LDHAP00338 332 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 POLR2EP19388 210 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 SP100P23497 879 aaPredicted RBP11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 GGCXP38435 758 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 GUCY2FP51841 1108 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 RAB15P59190 212 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 LSAMPQ13449 338 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 PTGISQ16647 500 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 ME3Q16798 604 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 ANKRD20A2Q5SQ80 823 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 ANKRD20A1Q5TYW2 823 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 ANKRD20A3Q5VUR7 823 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 KANK3Q6NY19 840 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 PPFIBP1Q86W92 1011 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 RNF10Q8N5U6 811 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 DIS3LQ8TF46 1054 aaKnown RBP11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 ZCWPW1Q9H0M4 648 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 PPP2R2CQ9Y2T4 447 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 C9orf84Q5VXU9 1444 aa11.93□□□□□ -0.5
PDLIM5-210ENST00000508216 FIBPO43427 364 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 GSPT1P15170 499 aaKnown RBP11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 NEK4P51957 841 aa11.92□□□□□ -0.5
PDLIM5-210ENST00000508216 GNG11P61952 73 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms