RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TPX2Q9ULW0 747 aaKnown RBP4.44□□□□□ -1.7
HMGB1P22-201ENST00000505315 INVSQ9Y283 1065 aa4.44□□□□□ -1.7
HMGB1P22-201ENST00000505315 TRAF6Q9Y4K3 522 aa4.44□□□□□ -1.7
HMGB1P22-201ENST00000505315 IPPQ9Y573 584 aa4.44□□□□□ -1.7
HMGB1P22-201ENST00000505315 PCDHA9Q9Y5H5 950 aa4.44□□□□□ -1.7
HMGB1P22-201ENST00000505315 PRRT4C9JH25 899 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 J3QL48 77 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 TBX1O43435 398 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 DLX3O60479 287 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ULK1O75385 1050 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 CLEC3AO75596 197 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 KCNH1O95259 989 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 CRTAMO95727 393 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 AGR2O95994 175 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ASGR2P07307 311 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 C6orf222P0C671 652 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ESRRAP11474 423 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 LPOP22079 712 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 COPB2P35606 906 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ZEB1P37275 1124 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ADCYAP1R1P41586 468 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ECI1P42126 302 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 MAPK9P45984 424 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 IREB2P48200 963 aaKnown RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 KPNA1P52294 538 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 SCAND1P57086 179 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ZNF280AP59817 542 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 SIM2Q14190 667 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 LLGL1Q15334 1064 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 TOMM20Q15388 145 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 JAKMIP3Q5VZ66 844 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 POMZP3Q6PJE2 187 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 CCDC149Q6ZUS6 474 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 MTDHQ86UE4 582 aaKnown RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 PPFIBP1Q86W92 1011 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 C12orf40Q86WS4 652 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 TMEM192Q8IY95 271 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 GSTCDQ8NEC7 633 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 BRF1Q92994 677 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 FAM163AQ96GL9 167 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 SCLYQ96I15 445 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 EIF2AK1Q9BQI3 630 aaKnown RBP4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 VTA1Q9NP79 307 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 C14orf119Q9NWQ9 140 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 MARK1Q9P0L2 795 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 GTF2IRD1Q9UHL9 959 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 PCDHGC4Q9Y5F7 938 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 DGKBQ9Y6T7 804 aa4.43□□□□□ -1.7
HMGB1P22-201ENST00000505315 ABHD14A-ACY1A0A1B0GW23 586 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 hCG_1642624A0A1W2PR95 340 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 C9IYK1 514 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 OFD1O75665 1012 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 RNASEH2AO75792 299 aaKnown RBP4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 SNRPB2P08579 225 aaKnown RBP4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 FAM163BP0C2L3 166 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 FAM157BP0CG42 384 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 CPB1P15086 417 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 CCT5P48643 541 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 GJA9P57773 515 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 PPP2R5DQ14738 602 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 ICE2Q659A1 982 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 DCAF15Q66K64 600 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 CC2D1AQ6P1N0 951 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 VN1R5Q7Z5H4 357 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 PDZD3Q86UT5 571 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 ZC3H7AQ8IWR0 971 aaKnown RBP4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 CYP4X1Q8N118 509 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 CBARPQ8N350 705 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 IGSF22Q8N9C0 903 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 C1orf162Q8NEQ5 155 aaPredicted RBP4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 CDK5RAP3Q96JB5 506 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 CCDC138Q96M89 665 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 SLC30A3Q99726 388 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 SLC13A1Q9BZW2 595 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 RNF38Q9H0F5 515 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 SLC12A5Q9H2X9 1139 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 FAM204AQ9H8W3 233 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 TCF7L1Q9HCS4 588 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 ZNF69Q9UC07 566 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 SUSD2Q9UGT4 822 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 PDZRN3Q9UPQ7 1066 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 LRCH1Q9Y2L9 728 aa4.42□□□□□ -1.7
HMGB1P22-201ENST00000505315 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 KLHL33A6NCF5 533 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 TTLL8A6PVC2 850 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 AQP7O14520 342 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 FIBPO43427 364 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 GLRX3O76003 335 aaKnown RBP4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 CYP11A1P05108 521 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 SRGAP2CP0DJJ0 459 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 MAPTP10636 758 aaKnown RBP4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 HOXD8P13378 290 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 CD33P20138 364 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 TNFAIP3P21580 790 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 CHKAP35790 457 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 ARL4DP49703 201 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 GPLD1P80108 840 aa4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 DDX10Q13206 875 aaKnown RBP4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 PDE1CQ14123 709 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P22-201ENST00000505315 ODF1Q14990 250 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms