RNA–Protein interactions for RNA: ENST00000502878.6

HMCES-204, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-204ENST00000502878 CLIC4Q9Y696 253 aa27.17■■□□□ 1.94
HMCES-204ENST00000502878 GALNT17Q6IS24 598 aa27.17■■□□□ 1.94
HMCES-204ENST00000502878 RASGRP4Q8TDF6 673 aa27.17■■□□□ 1.94
HMCES-204ENST00000502878 C12orf42Q96LP6 360 aa27.17■■□□□ 1.94
HMCES-204ENST00000502878 TANGO6Q9C0B7 1094 aa27.17■■□□□ 1.94
HMCES-204ENST00000502878 C6orf50Q9HD87 102 aa27.17■■□□□ 1.94
HMCES-204ENST00000502878 M0R2N6 131 aa27.16■■□□□ 1.94
HMCES-204ENST00000502878 PCDHA1Q9Y5I3 950 aa27.16■■□□□ 1.94
HMCES-204ENST00000502878 ESYT2A0FGR8 921 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 GADD45BO75293 160 aaPredicted RBP27.15■■□□□ 1.94
HMCES-204ENST00000502878 PTMSP20962 102 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 TOB1P50616 345 aaPredicted RBP27.15■■□□□ 1.94
HMCES-204ENST00000502878 OTUD5Q96G74 571 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 RTEL1Q9NZ71 1219 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 CSPP1Q1MSJ5 1256 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 LDLRAD1Q5T700 205 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 PPP1R18Q6NYC8 613 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 FBXO11Q86XK2 927 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 ERO1BQ86YB8 467 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 AMNQ9BXJ7 453 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 RANBP17Q9H2T7 1088 aaKnown RBP27.15■■□□□ 1.94
HMCES-204ENST00000502878 PCDHA6Q9UN73 950 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 PCDHA8Q9Y5H6 950 aa27.15■■□□□ 1.94
HMCES-204ENST00000502878 TAL1P17542 331 aaPredicted RBP27.14■■□□□ 1.94
HMCES-204ENST00000502878 GNA11P29992 359 aa27.14■■□□□ 1.94
HMCES-204ENST00000502878 PPATQ06203 517 aa27.14■■□□□ 1.94
HMCES-204ENST00000502878 PIK3AP1Q6ZUJ8 805 aa27.14■■□□□ 1.94
HMCES-204ENST00000502878 SLF1Q9BQI6 1058 aa27.14■■□□□ 1.94
HMCES-204ENST00000502878 TMOD4Q9NZQ9 345 aa27.14■■□□□ 1.94
HMCES-204ENST00000502878 SPDYE5A6NIY4 337 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 USH1GQ495M9 461 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 SH3D19Q5HYK7 790 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 ANO1Q5XXA6 986 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 CCDC174Q6PII3 467 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 PRPF38AQ8NAV1 312 aaKnown RBP27.13■■□□□ 1.93
HMCES-204ENST00000502878 RBM46Q8TBY0 533 aaKnown RBP27.13■■□□□ 1.93
HMCES-204ENST00000502878 POLR3EQ9NVU0 708 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 RCOR1Q9UKL0 485 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 IRF6O14896 467 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 TRAK2O60296 914 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 FLOT1O75955 427 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 ADCY7P51828 1080 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 TPRNQ4KMQ1 711 aa27.13■■□□□ 1.93
HMCES-204ENST00000502878 ELP1O95163 1332 aa27.12■■□□□ 1.93
HMCES-204ENST00000502878 RILPL1Q5EBL4 403 aa27.12■■□□□ 1.93
HMCES-204ENST00000502878 ATP2B1P20020 1258 aa27.11■■□□□ 1.93
HMCES-204ENST00000502878 NASPP49321 788 aaPredicted RBP27.11■■□□□ 1.93
HMCES-204ENST00000502878 SF3A1Q15459 793 aaKnown RBP27.11■■□□□ 1.93
HMCES-204ENST00000502878 RIC8AQ9NPQ8 531 aa27.11■■□□□ 1.93
HMCES-204ENST00000502878 LINC00301Q8NCQ3 95 aa27.11■■□□□ 1.93
HMCES-204ENST00000502878 PPP1R9AQ9ULJ8 1098 aa27.11■■□□□ 1.93
HMCES-204ENST00000502878 CELF2O95319 508 aaKnown RBP27.1■■□□□ 1.93
HMCES-204ENST00000502878 CHADLQ6NUI6 762 aa27.1■■□□□ 1.93
HMCES-204ENST00000502878 OPTNQ96CV9 577 aa27.1■■□□□ 1.93
HMCES-204ENST00000502878 GBA2Q9HCG7 927 aaPredicted RBP27.1■■□□□ 1.93
HMCES-204ENST00000502878 BIN2Q9UBW5 565 aaPredicted RBP27.1■■□□□ 1.93
HMCES-204ENST00000502878 BICD2Q8TD16 824 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 GPT2Q8TD30 523 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 PSTPIP2Q9H939 334 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 TMEM260Q9NX78 707 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 PCDHB6Q9Y5E3 794 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 DDX49Q9Y6V7 483 aaKnown RBP27.09■■□□□ 1.93
HMCES-204ENST00000502878 CCDC194A0A1B0GVG4 234 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 WNT7AO00755 349 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 YEATS4O95619 227 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 ITGBL1O95965 494 aaPredicted RBP27.09■■□□□ 1.93
HMCES-204ENST00000502878 PPIL2Q13356 520 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 STK38Q15208 465 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 REXO1Q8N1G1 1221 aaKnown RBP27.09■■□□□ 1.93
HMCES-204ENST00000502878 CUL5Q93034 780 aa27.09■■□□□ 1.93
HMCES-204ENST00000502878 UBE2SQ16763 222 aa27.08■■□□□ 1.93
HMCES-204ENST00000502878 JAKMIP3Q5VZ66 844 aa27.08■■□□□ 1.93
HMCES-204ENST00000502878 SLC10A4Q96EP9 437 aa27.08■■□□□ 1.93
HMCES-204ENST00000502878 PGBD1Q96JS3 809 aa27.08■■□□□ 1.93
HMCES-204ENST00000502878 NOL7Q9UMY1 257 aaKnown RBP27.08■■□□□ 1.93
HMCES-204ENST00000502878 UBE2HP62256 183 aa27.08■■□□□ 1.92
HMCES-204ENST00000502878 PTPAQ15257 358 aa27.08■■□□□ 1.92
HMCES-204ENST00000502878 CATSPERGQ6ZRH7 1159 aa27.08■■□□□ 1.92
HMCES-204ENST00000502878 KCNH4Q9UQ05 1017 aa27.08■■□□□ 1.92
HMCES-204ENST00000502878 A0A0G2JLL6 359 aaPredicted RBP27.07■■□□□ 1.92
HMCES-204ENST00000502878 CXCL11O14625 94 aa27.07■■□□□ 1.92
HMCES-204ENST00000502878 GJA5P36382 358 aa27.07■■□□□ 1.92
HMCES-204ENST00000502878 MRPL12P52815 198 aaKnown RBP27.07■■□□□ 1.92
HMCES-204ENST00000502878 FKBP1BP68106 108 aa27.07■■□□□ 1.92
HMCES-204ENST00000502878 SLC39A14Q15043 492 aa27.07■■□□□ 1.92
HMCES-204ENST00000502878 TREML2Q5T2D2 321 aa27.07■■□□□ 1.92
HMCES-204ENST00000502878 PRRT2Q7Z6L0 340 aaPredicted RBP27.07■■□□□ 1.92
HMCES-204ENST00000502878 SLC38A10Q9HBR0 1119 aa27.07■■□□□ 1.92
HMCES-204ENST00000502878 ZNF536O15090 1300 aa27.07■■□□□ 1.92
HMCES-204ENST00000502878 SKOR2Q2VWA4 1001 aaPredicted RBP27.06■■□□□ 1.92
HMCES-204ENST00000502878 KRT25Q7Z3Z0 450 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 C2orf69Q8N8R5 385 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 ATG4CQ96DT6 458 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 WNK4Q96J92 1243 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 USP17L15C9J2P7 530 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 USP17L13C9JLJ4 530 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 USP17L11C9JVI0 530 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 USP17L18D6R9N7 530 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 USP17L22D6RA61 530 aa27.06■■□□□ 1.92
HMCES-204ENST00000502878 USP17L17D6RBQ6 530 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms