RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 ZFYP08048 801 aaPredicted RBP13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 RARBP10826 455 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 GNAT2P19087 354 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 TMEM132BQ14DG7 1078 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 SBK1Q52WX2 424 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 CTR9Q6PD62 1173 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 RNF180Q86T96 592 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 KRTAP3-3Q9BYR6 98 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 KRTAP3-2Q9BYR7 98 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 MTMR10Q9NXD2 777 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 PPP1R9AQ9ULJ8 1098 aa13.31□□□□□ -0.28
UBE2D3-211ENST00000502404 CYP2D7A0A087X1C5 515 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 VWA5AO00534 786 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 ADCYAP1R1P41586 468 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 C1orf53Q5VUE5 145 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 CLEC10AQ8IUN9 316 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 MSL3Q8N5Y2 521 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 TATDN2Q93075 761 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 CNPY2Q9Y2B0 182 aa13.3□□□□□ -0.28
UBE2D3-211ENST00000502404 MINDY4BA8MYZ0 360 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 ZBED4O75132 1171 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 LRRC41Q15345 812 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 SLFNL1Q499Z3 407 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 PRAMEF19Q5SWL8 479 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 FAM83BQ5T0W9 1011 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 ANO1Q5XXA6 986 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 ADGRD1Q6QNK2 874 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 NUDT18Q6ZVK8 323 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 Q7L0L9 218 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 KBTBD3Q8NAB2 608 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 PRPF38AQ8NAV1 312 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 DDX11Q96FC9 970 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 STRBPQ96SI9 672 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 PHOX2BQ99453 314 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 SLF1Q9BQI6 1058 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 TINF2Q9BSI4 451 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 TEX13BQ9BXU2 312 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 PRDM5Q9NQX1 630 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 NYAP2Q9P242 653 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 ZNF236Q9UL36 1845 aa13.29□□□□□ -0.28
UBE2D3-211ENST00000502404 APPP05067 770 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 AKR1A1P14550 325 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 PDE4DQ08499 809 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 SNX17Q15036 470 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 ZNF792Q3KQV3 632 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 APPBP2Q92624 585 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 NACAP1Q9BZK3 213 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 FBXO28Q9NVF7 368 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 SYNPO2Q9UMS6 1093 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 PHF24Q9UPV7 400 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 TACC3Q9Y6A5 838 aa13.28□□□□□ -0.28
UBE2D3-211ENST00000502404 BHMG1C9JSJ3 638 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 F5H6K3 240 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 RNF113AO15541 343 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 SMARCA5O60264 1052 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 PGK2P07205 417 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 SLC3A2P08195 630 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 TDO2P48775 406 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 KLRC3Q07444 240 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 TRIM60Q495X7 471 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 FAM47AQ5JRC9 791 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 ZNF697Q5TEC3 545 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 FERMT2Q96AC1 680 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 TSEN34Q9BSV6 310 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 CLIP2Q9UDT6 1046 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 FAM184BQ9ULE4 1060 aa13.27□□□□□ -0.29
UBE2D3-211ENST00000502404 GSG1L2A8MUP6 293 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 PATL2C9JE40 543 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 ERC2O15083 957 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 FDX1P10109 184 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 RASA1P20936 1047 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 SNRNP48Q6IEG0 339 aaKnown RBP13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 NUP133Q8WUM0 1156 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 DCTPP1Q9H773 170 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 SPC25Q9HBM1 224 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 FBXO40Q9UH90 709 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 FEM1BQ9UK73 627 aa13.26□□□□□ -0.29
UBE2D3-211ENST00000502404 MYH8P13535 1937 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 GPAA1O43292 621 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 HRO43593 1189 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 NDUFB10O96000 172 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 TLE2Q04725 743 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 PDE4BQ07343 736 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 REPS2Q8NFH8 660 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 BADQ92934 168 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 MKL1Q969V6 931 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 RLFQ13129 1914 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
UBE2D3-211ENST00000502404 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 LAMA3Q16787 3333 aa13.24□□□□□ -0.29
UBE2D3-211ENST00000502404 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms