RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 TNPO2O14787 897 aaKnown RBP16.49■□□□□ 0.23
RNF4-202ENST00000502316 CYTH3O43739 400 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 ICAM1P05362 532 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 ERCC3P19447 782 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 NEK4P51957 841 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 SNRNP48Q6IEG0 339 aaKnown RBP16.49■□□□□ 0.23
RNF4-202ENST00000502316 TMTC3Q6ZXV5 915 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.49■□□□□ 0.23
RNF4-202ENST00000502316 GPR142Q7Z601 462 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 CTU1Q7Z7A3 348 aaKnown RBP16.49■□□□□ 0.23
RNF4-202ENST00000502316 NBPF11Q86T75 865 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 RAB11FIP4Q86YS3 637 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 CPXCR1Q8N123 301 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 ZNF274Q96GC6 653 aaPredicted RBP16.49■□□□□ 0.23
RNF4-202ENST00000502316 RBM28Q9NW13 759 aaKnown RBP16.49■□□□□ 0.23
RNF4-202ENST00000502316 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 ZNF236Q9UL36 1845 aa16.49■□□□□ 0.23
RNF4-202ENST00000502316 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 PLEKHA8P1O95397 391 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
RNF4-202ENST00000502316 PDIA3P30101 505 aaKnown RBP16.48■□□□□ 0.23
RNF4-202ENST00000502316 AK2P54819 239 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 SNAP25P60880 206 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 CDC37Q16543 378 aaPredicted RBP16.48■□□□□ 0.23
RNF4-202ENST00000502316 RTN1Q16799 776 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 PLEKHH3Q7Z736 793 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 COA7Q96BR5 231 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 AGBL1Q96MI9 1066 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
RNF4-202ENST00000502316 SRRDQ9UH36 339 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 RIPK3Q9Y572 518 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 TRIM17Q9Y577 477 aa16.48■□□□□ 0.23
RNF4-202ENST00000502316 PLXNB2O15031 1838 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 ZBTB5O15062 677 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 STRNO43815 780 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 HOXD10P28358 340 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 METAP2P50579 478 aaKnown RBP eCLIP16.47■□□□□ 0.23
RNF4-202ENST00000502316 PRMT2P55345 433 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 QRICH1Q2TAL8 776 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 TKFCQ3LXA3 575 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 NCAPG2Q86XI2 1143 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 CCAR1Q8IX12 1150 aaKnown RBP16.47■□□□□ 0.23
RNF4-202ENST00000502316 ABRAQ8N0Z2 381 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 SRBD1Q8N5C6 995 aaKnown RBP16.47■□□□□ 0.23
RNF4-202ENST00000502316 CHST13Q8NET6 341 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 GJD2Q9UKL4 321 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 CCPG1Q9ULG6 757 aa16.47■□□□□ 0.23
RNF4-202ENST00000502316 DOCK3Q8IZD9 2030 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
RNF4-202ENST00000502316 ECM2O94769 699 aaPredicted RBP16.46■□□□□ 0.23
RNF4-202ENST00000502316 PTPREP23469 700 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 CDC27P30260 824 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 FUT2Q10981 343 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 GRB14Q14449 540 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 RABEP1Q15276 862 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
RNF4-202ENST00000502316 MORN1Q5T089 497 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 SOCS4Q8WXH5 440 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 USP6NLQ92738 828 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
RNF4-202ENST00000502316 SLC15A5A6NIM6 579 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 PRKCZQ05513 592 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 IRF5Q13568 498 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 PIGSQ96S52 555 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 TPCN1Q9ULQ1 816 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 NAP1L2Q9ULW6 460 aaPredicted RBP16.45■□□□□ 0.22
RNF4-202ENST00000502316 GABRQQ9UN88 632 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 PTPN22Q9Y2R2 807 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 IVNS1ABPQ9Y6Y0 642 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
RNF4-202ENST00000502316 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
RNF4-202ENST00000502316 PNMA6FA0A0J9YX94 578 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 PPP1R11O60927 126 aaPredicted RBP16.44■□□□□ 0.22
RNF4-202ENST00000502316 FCER1AP12319 257 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 ALAS1P13196 640 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 ADD1P35611 737 aaKnown RBP16.44■□□□□ 0.22
RNF4-202ENST00000502316 FLT3LGP49771 235 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 FBXO11Q86XK2 927 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 CMTR1Q8N1G2 835 aaKnown RBP16.44■□□□□ 0.22
RNF4-202ENST00000502316 TRERF1Q96PN7 1200 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 NUDT12Q9BQG2 462 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 LARP6Q9BRS8 491 aaKnown RBP16.44■□□□□ 0.22
RNF4-202ENST00000502316 AMNQ9BXJ7 453 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 ACAD9Q9H845 621 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
RNF4-202ENST00000502316 RNF146Q9NTX7 359 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 SMCHD1A6NHR9 2005 aa16.44■□□□□ 0.22
RNF4-202ENST00000502316 MYH6P13533 1939 aa16.43■□□□□ 0.22
RNF4-202ENST00000502316 HOXC6P09630 235 aa16.43■□□□□ 0.22
RNF4-202ENST00000502316 XRCC5P13010 732 aaKnown RBP16.43■□□□□ 0.22
RNF4-202ENST00000502316 TAL1P17542 331 aaPredicted RBP16.43■□□□□ 0.22
RNF4-202ENST00000502316 ADORA2AP29274 412 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms