RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RASSF7Q02833 373 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 DUOXA2Q1HG44 320 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 ICE2Q659A1 982 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 HGSNATQ68CP4 663 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 CCDC174Q6PII3 467 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 LRFN4Q6PJG9 635 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 CDC37L1Q7L3B6 337 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 NECAB2Q7Z6G3 386 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 DMRTC2Q8IXT2 367 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 CPXCR1Q8N123 301 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 GPR161Q8N6U8 529 aaKnown RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 NGDNQ8NEJ9 315 aaKnown RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 NEDD1Q8NHV4 660 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 FBXO41Q8TF61 875 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 ACDQ96AP0 544 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 ZNF669Q96BR6 464 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 KLHDC7BQ96G42 594 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 KIF2CQ99661 725 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 MDFIQ99750 246 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 RUSC1Q9BVN2 902 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 SARGQ9BW04 601 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 FBRSQ9HAH7 460 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 PIDD1Q9HB75 910 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 NCOA5Q9HCD5 579 aaKnown RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 SSU72Q9NP77 194 aaKnown RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 NGRNQ9NPE2 291 aaKnown RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 ATG3Q9NT62 314 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 TRHDEQ9UKU6 1024 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 TPX2Q9ULW0 747 aaKnown RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 AP4E1Q9UPM8 1137 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 FAM50BQ9Y247 325 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 POLR3KQ9Y2Y1 108 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 STARD13Q9Y3M8 1113 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 CSADQ9Y600 493 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 TSPOAP1O95153 1857 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 ARHGEF12Q9NZN5 1544 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 CCDC18Q5T9S5 1454 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 AKNAQ7Z591 1439 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 RICTORQ6R327 1708 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 KDM5CP41229 1560 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 DNAJC25-GNG10A0A024R161 153 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 LOC100289279A0A1B0GTE1 492 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 FAM83GA6ND36 823 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 RASSF10A6NK89 507 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 UPK3BL1B0FP48 263 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 UPK3BL2E5RIL1 263 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 AGRPO00253 132 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 GABRDO14764 452 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 PLD2O14939 933 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 GPR39O43194 453 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 OIP5O43482 229 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 NBNO60934 754 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 RFPL1O75677 317 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 ABLIM3O94929 683 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 BCRP11274 1271 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 CPEP16870 476 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 GRK4P32298 578 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 HTR3AP46098 478 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 POU5F1Q01860 360 aaKnown RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 ID3Q02535 119 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 STAT4Q14765 748 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 NCAPHQ15003 741 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 PCBP1Q15365 356 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 GRIK5Q16478 980 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 KIF4BQ2VIQ3 1234 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 ALFQ53S48 1182 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 COBLL1Q53SF7 1204 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 FAM209AQ5JX71 171 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 RNFT1Q5M7Z0 435 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 RNF219Q5W0B1 726 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 OVOS1Q6IE37 1185 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 MPRIPQ6WCQ1 1025 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 C20orf204Q6ZNR8 217 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 EEPD1Q7L9B9 569 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 NLRC3Q7RTR2 1065 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 TTC6Q86TZ1 520 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 PHACTR4Q8IZ21 702 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 DTWD1Q8N5C7 304 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 ENAHQ8N8S7 591 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 ENOX1Q8TC92 643 aaKnown RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 COG1Q8WTW3 980 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 DDX1Q92499 740 aaKnown RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 EXOC2Q96KP1 924 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 STRBPQ96SI9 672 aaKnown RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 CDC5LQ99459 802 aaKnown RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 PHAXQ9H814 394 aaKnown RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 PRDM6Q9NQX0 595 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 C9orf78Q9NZ63 289 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 MAP3K1Q13233 1512 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 GPATCH8Q9UKJ3 1502 aaKnown RBP5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 FANCAO15360 1455 aa5.31□□□□□ -1.56
HMGB1P21-201ENST00000502313 FAM86C2PA6NEL3 165 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 MEIS3P2A8K0S8 358 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 TERTO14746 1132 aaKnown RBP5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 AOC2O75106 756 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 ECEL1O95672 775 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 BAG6P46379 1132 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 DGKGP49619 791 aa5.3□□□□□ -1.56
HMGB1P21-201ENST00000502313 INPP5AQ14642 412 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms