RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 CDC27P30260 824 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 COPB2P35606 906 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 STAT3P40763 770 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 PLS1Q14651 629 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 KIF22Q14807 665 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 CDC37Q16543 378 aaPredicted RBP16.79■□□□□ 0.28
USP11-212ENST00000497179 SNRNP48Q6IEG0 339 aaKnown RBP16.79■□□□□ 0.28
USP11-212ENST00000497179 CCDC174Q6PII3 467 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 SRBD1Q8N5C6 995 aaKnown RBP16.79■□□□□ 0.28
USP11-212ENST00000497179 CD99L2Q8TCZ2 262 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 LARP6Q9BRS8 491 aaKnown RBP16.79■□□□□ 0.28
USP11-212ENST00000497179 PORCNQ9H237 461 aa16.79■□□□□ 0.28
USP11-212ENST00000497179 RAVER2Q9HCJ3 691 aaKnown RBP16.79■□□□□ 0.28
USP11-212ENST00000497179 CNTNAP5Q8WYK1 1306 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 CCDC196A0A1B0GTZ2 297 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 CTGFP29279 349 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 MAPK4P31152 587 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 PSMC4P43686 418 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 FCGRTP55899 365 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 CAP1Q01518 475 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 FUT2Q10981 343 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 CPXCR1Q8N123 301 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 TRIM47Q96LD4 638 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 ARHGAP39Q9C0H5 1083 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 MROH8Q9H579 483 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 PNMA2Q9UL42 364 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 MGAMO43451 1857 aa16.78■□□□□ 0.28
USP11-212ENST00000497179 ZNF236Q9UL36 1845 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 ZBTB5O15062 677 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 ST18O60284 1047 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 PFKFB2O60825 505 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 ADD1P35611 737 aaKnown RBP16.77■□□□□ 0.28
USP11-212ENST00000497179 QRICH1Q2TAL8 776 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 TKFCQ3LXA3 575 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
USP11-212ENST00000497179 CMTR1Q8N1G2 835 aaKnown RBP16.77■□□□□ 0.28
USP11-212ENST00000497179 AGBL1Q96MI9 1066 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 PIGSQ96S52 555 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 EFCC1Q9HA90 598 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 NCOA5Q9HCD5 579 aaKnown RBP16.77■□□□□ 0.28
USP11-212ENST00000497179 VAT1LQ9HCJ6 419 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.28
USP11-212ENST00000497179 TNPO2O14787 897 aaKnown RBP16.76■□□□□ 0.27
USP11-212ENST00000497179 ERCC3P19447 782 aa16.76■□□□□ 0.27
USP11-212ENST00000497179 CCT2P78371 535 aaKnown RBP16.76■□□□□ 0.27
USP11-212ENST00000497179 ARHGEF6Q15052 776 aa16.76■□□□□ 0.27
USP11-212ENST00000497179 ME3Q16798 604 aa16.76■□□□□ 0.27
USP11-212ENST00000497179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.76■□□□□ 0.27
USP11-212ENST00000497179 PLEKHH3Q7Z736 793 aa16.76■□□□□ 0.27
USP11-212ENST00000497179 HOMER1Q86YM7 354 aa16.76■□□□□ 0.27
USP11-212ENST00000497179 CCAR1Q8IX12 1150 aaKnown RBP16.76■□□□□ 0.27
USP11-212ENST00000497179 RRP36Q96EU6 259 aaKnown RBP16.76■□□□□ 0.27
USP11-212ENST00000497179 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
USP11-212ENST00000497179 RIPK3Q9Y572 518 aa16.76■□□□□ 0.27
USP11-212ENST00000497179 PNMA6FA0A0J9YX94 578 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 PPP1R11O60927 126 aaPredicted RBP16.75■□□□□ 0.27
USP11-212ENST00000497179 LARGE1O95461 756 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 FMNL1O95466 1100 aaPredicted RBP16.75■□□□□ 0.27
USP11-212ENST00000497179 GNRH1P01148 92 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 STK3Q13188 491 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 NTRK3Q16288 839 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 GPR142Q7Z601 462 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 NCAPG2Q86XI2 1143 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 FBXO11Q86XK2 927 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 CHST13Q8NET6 341 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 SLKQ9H2G2 1235 aaPredicted RBP16.75■□□□□ 0.27
USP11-212ENST00000497179 RNF146Q9NTX7 359 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 PLXNB2O15031 1838 aa16.75■□□□□ 0.27
USP11-212ENST00000497179 ABCB11O95342 1321 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 ECM2O94769 699 aaPredicted RBP16.74■□□□□ 0.27
USP11-212ENST00000497179 ALAS1P13196 640 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 IFNAR1P17181 557 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 TAL1P17542 331 aaPredicted RBP16.74■□□□□ 0.27
USP11-212ENST00000497179 PTPREP23469 700 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 SCRN1Q12765 414 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 CCDC82Q8N4S0 544 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 COA7Q96BR5 231 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
USP11-212ENST00000497179 AMNQ9BXJ7 453 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 CWC22Q9HCG8 908 aaKnown RBP16.74■□□□□ 0.27
USP11-212ENST00000497179 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
USP11-212ENST00000497179 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
USP11-212ENST00000497179 CASP8AP2Q9UKL3 1982 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 STRNO43815 780 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 SLC4A3P48751 1232 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 MCM2P49736 904 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 TRAF1Q13077 416 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 GRB14Q14449 540 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 USH1GQ495M9 461 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
USP11-212ENST00000497179 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 ABRAQ8N0Z2 381 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 SOCS4Q8WXH5 440 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 PIBF1Q8WXW3 757 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 TRERF1Q96PN7 1200 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 ACAD9Q9H845 621 aa16.73■□□□□ 0.27
USP11-212ENST00000497179 HOMER2Q9NSB8 354 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms