RNA–Protein interactions for RNA: ENST00000496169.5

MKRN1-215, Transcript of makorin ring finger protein 1, human

TSL 2

Gene MKRN1, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN1-215	ENST00000496169	TRDN	Q13061	729 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	LHX8	Q68G74	356 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	CCDC174	Q6PII3	467 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	PNMA1	Q8ND90	353 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	TRPV1	Q8NER1	839 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	DDX11	Q96FC9	970 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	UBAC1	Q9BSL1	405 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	KAT14	Q9H8E8	782 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	FBXO40	Q9UH90	709 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	OGDHL	Q9ULD0	1010 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	RBM8A	Q9Y5S9	174 aa	Known RBP	27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	TAF6L	Q9Y6J9	622 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	FRMPD3	Q5JV73	1810 aa		27.31	■■□□□ 1.96
MKRN1-215	ENST00000496169	SYDE2	Q5VT97	1194 aa		27.3	■■□□□ 1.96
MKRN1-215	ENST00000496169	CYB5R4	Q7L1T6	521 aa		27.3	■■□□□ 1.96
MKRN1-215	ENST00000496169	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	27.3	■■□□□ 1.96
MKRN1-215	ENST00000496169	HOMER2	Q9NSB8	354 aa		27.3	■■□□□ 1.96
MKRN1-215	ENST00000496169	CYBA	P13498	195 aa		27.3	■■□□□ 1.96
MKRN1-215	ENST00000496169	CNGA1	P29973	690 aa		27.3	■■□□□ 1.96
MKRN1-215	ENST00000496169	LSG1	Q9H089	658 aa	Known RBP	27.3	■■□□□ 1.96
MKRN1-215	ENST00000496169	DNAJC25-GNG10	A0A024R161	153 aa		27.29	■■□□□ 1.96
MKRN1-215	ENST00000496169		E7EWF7	191 aa		27.29	■■□□□ 1.96
MKRN1-215	ENST00000496169	ANKLE1	Q8NAG6	615 aa		27.29	■■□□□ 1.96
MKRN1-215	ENST00000496169	ANP32E	Q9BTT0	268 aa		27.29	■■□□□ 1.96
MKRN1-215	ENST00000496169	RANBP17	Q9H2T7	1088 aa	Known RBP	27.29	■■□□□ 1.96
MKRN1-215	ENST00000496169	PRAMEF19	Q5SWL8	479 aa		27.28	■■□□□ 1.96
MKRN1-215	ENST00000496169	ANKRD35	Q8N283	1001 aa		27.28	■■□□□ 1.96
MKRN1-215	ENST00000496169	PAWR	Q96IZ0	340 aa	Known RBP	27.28	■■□□□ 1.96
MKRN1-215	ENST00000496169	ALAS1	P13196	640 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	TKFC	Q3LXA3	575 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	GPATCH4	Q5T3I0	446 aa	Known RBP	27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	STOX1	Q6ZVD7	989 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	DIS3L	Q8TF46	1054 aa	Known RBP	27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	TRERF1	Q96PN7	1200 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	TINF2	Q9BSI4	451 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	ACAD9	Q9H845	621 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	RNF146	Q9NTX7	359 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	DDX20	Q9UHI6	824 aa	Known RBP	27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	MCM3AP	O60318	1980 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	GOLGA8H	P0CJ92	632 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	MNX1	P50219	401 aa	Predicted RBP	27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	SEC23A	Q15436	765 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	IFIT1B	Q5T764	474 aa	Known RBP	27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	PRPF38B	Q5VTL8	546 aa	Known RBP	27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	NCOA7	Q8NI08	942 aa		27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	UPF2	Q9HAU5	1272 aa	Known RBP	27.27	■■□□□ 1.96
MKRN1-215	ENST00000496169	ICAM1	P05362	532 aa		27.26	■■□□□ 1.95
MKRN1-215	ENST00000496169	CCPG1	Q9ULG6	757 aa		27.26	■■□□□ 1.95
MKRN1-215	ENST00000496169	MSC	O60682	206 aa		27.25	■■□□□ 1.95
MKRN1-215	ENST00000496169	NECAB2	Q7Z6G3	386 aa		27.25	■■□□□ 1.95
MKRN1-215	ENST00000496169	RALYL	Q86SE5	291 aa	Known RBP	27.25	■■□□□ 1.95
MKRN1-215	ENST00000496169	HTATIP2	Q9BUP3	242 aa		27.25	■■□□□ 1.95
MKRN1-215	ENST00000496169	ANO2	Q9NQ90	1003 aa		27.25	■■□□□ 1.95
MKRN1-215	ENST00000496169	UBA5	Q9GZZ9	404 aa		27.24	■■□□□ 1.95
MKRN1-215	ENST00000496169	CEP290	O15078	2479 aa		27.24	■■□□□ 1.95
MKRN1-215	ENST00000496169	SEC24B	O95487	1268 aa		27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	TAL1	P17542	331 aa	Predicted RBP	27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	MUM1L1	Q5H9M0	696 aa		27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	DPF3	Q92784	378 aa		27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	CPVL	Q9H3G5	476 aa		27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	A1CF	Q9NQ94	594 aa	Known RBP	27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	MYH6	P13533	1939 aa		27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	SEPT4	O43236	478 aa		27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	CDC45	O75419	566 aa		27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	MSL3	Q8N5Y2	521 aa	Known RBP	27.23	■■□□□ 1.95
MKRN1-215	ENST00000496169	IFIT3	O14879	490 aa	Known RBP	27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	ASPRV1	Q53RT3	343 aa		27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	MAMDC4	Q6UXC1	1216 aa		27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	CHST3	Q7LGC8	479 aa		27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	ZNF467	Q7Z7K2	595 aa	Predicted RBP	27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	FGD4	Q96M96	766 aa		27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	NRBP1	Q9UHY1	535 aa		27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	ALPK3	Q96L96	1907 aa		27.22	■■□□□ 1.95
MKRN1-215	ENST00000496169	PARP1	P09874	1014 aa	Known RBP	27.21	■■□□□ 1.95
MKRN1-215	ENST00000496169	CNTN2	Q02246	1040 aa		27.21	■■□□□ 1.95
MKRN1-215	ENST00000496169	NECTIN1	Q15223	517 aa		27.21	■■□□□ 1.95
MKRN1-215	ENST00000496169	CASC1	Q6TDU7	716 aa		27.21	■■□□□ 1.95
MKRN1-215	ENST00000496169	SYNGAP1	Q96PV0	1343 aa		27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	ERICH2	A1L162	156 aa		27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	POTEB2	H3BUK9	544 aa		27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	SLC27A2	O14975	620 aa		27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	ANO1	Q5XXA6	986 aa		27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	MB21D2	Q8IYB1	491 aa	Predicted RBP	27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	FAM133A	Q8N9E0	248 aa		27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	TBC1D32	Q96NH3	1257 aa		27.2	■■□□□ 1.95
MKRN1-215	ENST00000496169	PFAS	O15067	1338 aa		27.2	■■□□□ 1.94
MKRN1-215	ENST00000496169	SNAI1	O95863	264 aa	Predicted RBP	27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	ANTXR2	P58335	489 aa		27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	CREB3L3	Q68CJ9	461 aa		27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	C11orf49	Q9H6J7	331 aa		27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	SENP2	Q9HC62	589 aa		27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	CNPY2	Q9Y2B0	182 aa		27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	ZNF865	P0CJ78	1059 aa	Predicted RBP	27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	SART3	Q15020	963 aa	Known RBP	27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	ADGRF4	Q8IZF3	695 aa		27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	CYP39A1	Q9NYL5	469 aa		27.19	■■□□□ 1.94
MKRN1-215	ENST00000496169	LCT	P09848	1927 aa		27.18	■■□□□ 1.94
MKRN1-215	ENST00000496169	EIF5B	O60841	1220 aa	Known RBP	27.18	■■□□□ 1.94
MKRN1-215	ENST00000496169	WTAP	Q15007	396 aa		27.18	■■□□□ 1.94
MKRN1-215	ENST00000496169	NSMF	Q6X4W1	530 aa		27.18	■■□□□ 1.94

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