RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 AGPAT5Q9NUQ2 364 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 KIAA1551Q9HCM1 1747 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 RREB1Q92766 1687 aa14.63□□□□□ -0.07
PTPN7-217ENST00000495688 LGALS16A8MUM7 142 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 HERVK_113P62684 666 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 OR8K1Q8NGG5 319 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 SH3RF3Q8TEJ3 882 aaPredicted RBP14.62□□□□□ -0.07
PTPN7-217ENST00000495688 HNRNPLLQ8WVV9 542 aaKnown RBP14.62□□□□□ -0.07
PTPN7-217ENST00000495688 CALCOCO1Q9P1Z2 691 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 LUC7L2Q9Y383 392 aaKnown RBP14.62□□□□□ -0.07
PTPN7-217ENST00000495688 WNK3Q9BYP7 1800 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 LAMB1P07942 1786 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 TRIM14Q14142 442 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 C12orf60Q5U649 245 aa14.62□□□□□ -0.07
PTPN7-217ENST00000495688 ATP1A1P05023 1023 aaKnown RBP14.61□□□□□ -0.07
PTPN7-217ENST00000495688 HPS3Q969F9 1004 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 MKNK2Q9HBH9 465 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 VPS18Q9P253 973 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 MKRN1Q9UHC7 482 aaKnown RBP14.61□□□□□ -0.07
PTPN7-217ENST00000495688 RCCD1A6NED2 376 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 LMAN1P49257 510 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 WHAMMP3Q1A5X7 153 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 TTI2Q6NXR4 508 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 HDXQ7Z353 690 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 DNAJC7Q99615 494 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 SAP30BPQ9UHR5 308 aaKnown RBP14.61□□□□□ -0.07
PTPN7-217ENST00000495688 DUSP10Q9Y6W6 482 aa14.61□□□□□ -0.07
PTPN7-217ENST00000495688 COL22A1Q8NFW1 1626 aaPredicted RBP14.61□□□□□ -0.07
PTPN7-217ENST00000495688 RASSF10A6NK89 507 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 PHACTR2O75167 634 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 PLCG1P19174 1290 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 CCDC122Q5T0U0 273 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 DGKHQ86XP1 1220 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 GIMAP8Q8ND71 665 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-217ENST00000495688 NLRP3Q96P20 1036 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 GPR101Q96P66 508 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-217ENST00000495688 DUSP9Q99956 384 aaKnown RBP14.6□□□□□ -0.07
PTPN7-217ENST00000495688 LACRTQ9GZZ8 138 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 MYO1AQ9UBC5 1043 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 PDS5AQ29RF7 1337 aaKnown RBP14.6□□□□□ -0.07
PTPN7-217ENST00000495688 STXBP3O00186 592 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 PSMA7O14818 248 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 RHOBTB3O94955 611 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 TSPY3P0CV98 308 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 TSPY8P0CW00 308 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 FCER1AP12319 257 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 STK4Q13043 487 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 CASP8Q14790 479 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 GRM4Q14833 912 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 TXNRD1Q16881 649 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 GPIHBP1Q8IV16 184 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 CSGALNACT2Q8N6G5 542 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 CAPZA3Q96KX2 299 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 TUBGCP2Q9BSJ2 902 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 CAPN11Q9UMQ6 739 aa14.6□□□□□ -0.07
PTPN7-217ENST00000495688 TUBB2AQ13885 445 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 LETM2Q2VYF4 491 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 CCDC178Q5BJE1 867 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 SLC10A5Q5PT55 438 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 NBPF5PQ86XG9 351 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-217ENST00000495688 TGFBRAP1Q8WUH2 860 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 MMS19Q96T76 1030 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 TUBB2BQ9BVA1 445 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 SH3GLB2Q9NR46 395 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 BARHL2Q9NY43 387 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 LRRIQ3A6PVS8 624 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-217ENST00000495688 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 TRIM21P19474 475 aaKnown RBP14.59□□□□□ -0.07
PTPN7-217ENST00000495688 EEF1GP26641 437 aaKnown RBP14.59□□□□□ -0.07
PTPN7-217ENST00000495688 CYP27A1Q02318 531 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 KCNB1Q14721 858 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 ANKRD40Q6AI12 368 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 TRAPPC11Q7Z392 1133 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 TXLNBQ8N3L3 684 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 TMEM47Q9BQJ4 181 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 CDCA7Q9BWT1 371 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-217ENST00000495688 FAN1Q9Y2M0 1017 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 FLT1P17948 1338 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 A0A1W2PQC6 194 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 ERLIN1O75477 346 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 ZMYND10O75800 440 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 AMIGO3Q86WK7 504 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 MAPKAPK5Q8IW41 473 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 SETDB2Q96T68 719 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 THAP9Q9H5L6 903 aa14.59□□□□□ -0.07
PTPN7-217ENST00000495688 EP400Q96L91 3159 aa14.58□□□□□ -0.07
PTPN7-217ENST00000495688 PSMD14O00487 310 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 CCNT1O60563 726 aaKnown RBP14.58□□□□□ -0.08
PTPN7-217ENST00000495688 PDE4DQ08499 809 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 GPS2Q13227 327 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 CABP7Q86V35 215 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 GDAP1L1Q96MZ0 367 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 HINFPQ9BQA5 517 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 TTYH3Q9C0H2 523 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 CCSER1Q9C0I3 900 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 HAUS4Q9H6D7 363 aa14.58□□□□□ -0.08
PTPN7-217ENST00000495688 MAGEC2Q9UBF1 373 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms