RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 IGHA2P01877 340 aa22.39■■□□□ 1.17
PCMT1-209ENST00000494411 CASC1Q6TDU7 716 aa22.39■■□□□ 1.17
PCMT1-209ENST00000494411 RALYLQ86SE5 291 aaKnown RBP22.39■■□□□ 1.17
PCMT1-209ENST00000494411 MAML3Q96JK9 1138 aa22.39■■□□□ 1.17
PCMT1-209ENST00000494411 AGBL1Q96MI9 1066 aa22.39■■□□□ 1.17
PCMT1-209ENST00000494411 CRISPLD2Q9H0B8 497 aa22.39■■□□□ 1.17
PCMT1-209ENST00000494411 TFRCP02786 760 aaKnown RBP22.38■■□□□ 1.17
PCMT1-209ENST00000494411 GOLGA8HP0CJ92 632 aa22.38■■□□□ 1.17
PCMT1-209ENST00000494411 SEC23AQ15436 765 aa22.38■■□□□ 1.17
PCMT1-209ENST00000494411 IFIT1BQ5T764 474 aaKnown RBP22.38■■□□□ 1.17
PCMT1-209ENST00000494411 NCOA7Q8NI08 942 aa22.38■■□□□ 1.17
PCMT1-209ENST00000494411 RANBP17Q9H2T7 1088 aaKnown RBP22.38■■□□□ 1.17
PCMT1-209ENST00000494411 CEP290O15078 2479 aa22.37■■□□□ 1.17
PCMT1-209ENST00000494411 ZNF792Q3KQV3 632 aa22.37■■□□□ 1.17
PCMT1-209ENST00000494411 CHST13Q8NET6 341 aa22.37■■□□□ 1.17
PCMT1-209ENST00000494411 RNF146Q9NTX7 359 aa22.37■■□□□ 1.17
PCMT1-209ENST00000494411 FBXO40Q9UH90 709 aa22.37■■□□□ 1.17
PCMT1-209ENST00000494411 SLC27A2O14975 620 aa22.36■■□□□ 1.17
PCMT1-209ENST00000494411 TAL1P17542 331 aaPredicted RBP22.36■■□□□ 1.17
PCMT1-209ENST00000494411 GPATCH4Q5T3I0 446 aaKnown RBP22.36■■□□□ 1.17
PCMT1-209ENST00000494411 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.36■■□□□ 1.17
PCMT1-209ENST00000494411 TRPV1Q8NER1 839 aa22.36■■□□□ 1.17
PCMT1-209ENST00000494411 DDX11Q96FC9 970 aa22.36■■□□□ 1.17
PCMT1-209ENST00000494411 FARP2O94887 1054 aaPredicted RBP22.35■■□□□ 1.17
PCMT1-209ENST00000494411 ALAS1P13196 640 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 CYBAP13498 195 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 CREB3L3Q68CJ9 461 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 CHST3Q7LGC8 479 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 UBE2Q1Q7Z7E8 422 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 MB21D2Q8IYB1 491 aaPredicted RBP22.35■■□□□ 1.17
PCMT1-209ENST00000494411 ANKRD35Q8N283 1001 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 CPVLQ9H3G5 476 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 ACAD9Q9H845 621 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 CCPG1Q9ULG6 757 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 DIS3Q9Y2L1 958 aaKnown RBP22.35■■□□□ 1.17
PCMT1-209ENST00000494411 MCM3APO60318 1980 aa22.35■■□□□ 1.17
PCMT1-209ENST00000494411 MYH6P13533 1939 aa22.34■■□□□ 1.17
PCMT1-209ENST00000494411 DNAJC25-GNG10A0A024R161 153 aa22.34■■□□□ 1.17
PCMT1-209ENST00000494411 IFIT3O14879 490 aaKnown RBP22.34■■□□□ 1.17
PCMT1-209ENST00000494411 ICAM1P05362 532 aa22.34■■□□□ 1.17
PCMT1-209ENST00000494411 ANTXR2P58335 489 aa22.34■■□□□ 1.17
PCMT1-209ENST00000494411 NECTIN1Q15223 517 aa22.34■■□□□ 1.17
PCMT1-209ENST00000494411 TKFCQ3LXA3 575 aa22.34■■□□□ 1.17
PCMT1-209ENST00000494411 TRERF1Q96PN7 1200 aa22.34■■□□□ 1.17
PCMT1-209ENST00000494411 ERICH2A1L162 156 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 CAPN2P17655 700 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 CNGA1P29973 690 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 ASPRV1Q53RT3 343 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 LHX8Q68G74 356 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 TINF2Q9BSI4 451 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 UBA5Q9GZZ9 404 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 SENP2Q9HC62 589 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 OGDHLQ9ULD0 1010 aa22.33■■□□□ 1.17
PCMT1-209ENST00000494411 LCTP09848 1927 aa22.32■■□□□ 1.16
PCMT1-209ENST00000494411 PARP1P09874 1014 aaKnown RBP22.32■■□□□ 1.16
PCMT1-209ENST00000494411 SART3Q15020 963 aaKnown RBP22.32■■□□□ 1.16
PCMT1-209ENST00000494411 MUM1L1Q5H9M0 696 aa22.32■■□□□ 1.16
PCMT1-209ENST00000494411 PRAMEF19Q5SWL8 479 aa22.32■■□□□ 1.16
PCMT1-209ENST00000494411 A1CFQ9NQ94 594 aaKnown RBP22.32■■□□□ 1.16
PCMT1-209ENST00000494411 WTAPQ15007 396 aa22.31■■□□□ 1.16
PCMT1-209ENST00000494411 TMEM67Q5HYA8 995 aa22.31■■□□□ 1.16
PCMT1-209ENST00000494411 ANKLE1Q8NAG6 615 aa22.31■■□□□ 1.16
PCMT1-209ENST00000494411 DIS3LQ8TF46 1054 aaKnown RBP22.31■■□□□ 1.16
PCMT1-209ENST00000494411 FGD4Q96M96 766 aa22.31■■□□□ 1.16
PCMT1-209ENST00000494411 DDX20Q9UHI6 824 aaKnown RBP22.31■■□□□ 1.16
PCMT1-209ENST00000494411 COL9A3Q14050 684 aaPredicted RBP22.3■■□□□ 1.16
PCMT1-209ENST00000494411 PAWRQ96IZ0 340 aaKnown RBP22.3■■□□□ 1.16
PCMT1-209ENST00000494411 PFASO15067 1338 aa22.3■■□□□ 1.16
PCMT1-209ENST00000494411 POTEB2H3BUK9 544 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 PRC1O43663 620 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 MNX1P50219 401 aaPredicted RBP22.29■■□□□ 1.16
PCMT1-209ENST00000494411 CNTN2Q02246 1040 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 CDC37Q16543 378 aaPredicted RBP22.29■■□□□ 1.16
PCMT1-209ENST00000494411 RNF20Q5VTR2 975 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 ZNF467Q7Z7K2 595 aaPredicted RBP22.29■■□□□ 1.16
PCMT1-209ENST00000494411 ADGRF4Q8IZF3 695 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 STAG2Q8N3U4 1231 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 IGDCC4Q8TDY8 1250 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 GPHNQ9NQX3 736 aaPredicted RBP22.29■■□□□ 1.16
PCMT1-209ENST00000494411 WDR19Q8NEZ3 1342 aa22.29■■□□□ 1.16
PCMT1-209ENST00000494411 SEPT4O43236 478 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 DHX16O60231 1041 aaKnown RBP22.28■■□□□ 1.16
PCMT1-209ENST00000494411 MSCO60682 206 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 MCM5P33992 734 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 ANO1Q5XXA6 986 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 MAMDC4Q6UXC1 1216 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 NSMFQ6X4W1 530 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 MSL3Q8N5Y2 521 aaKnown RBP22.28■■□□□ 1.16
PCMT1-209ENST00000494411 FAM133AQ8N9E0 248 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 CYP39A1Q9NYL5 469 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 NRBP1Q9UHY1 535 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 MAD2L2Q9UI95 211 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 PNMA2Q9UL42 364 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 SYNGAP1Q96PV0 1343 aa22.28■■□□□ 1.16
PCMT1-209ENST00000494411 BAZ2BQ9UIF8 2168 aaKnown RBP22.28■■□□□ 1.16
PCMT1-209ENST00000494411 ALPK3Q96L96 1907 aa22.27■■□□□ 1.16
PCMT1-209ENST00000494411 DNAH12Q6ZR08 3092 aa22.27■■□□□ 1.16
PCMT1-209ENST00000494411 NFIBO00712 420 aa22.27■■□□□ 1.16
PCMT1-209ENST00000494411 GRM4Q14833 912 aa22.27■■□□□ 1.16
PCMT1-209ENST00000494411 NECAB2Q7Z6G3 386 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms