RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 SLC38A10Q9HBR0 1119 aa21.15■□□□□ 0.98
NUP50-218ENST00000493456 CHGBP05060 677 aa21.14■□□□□ 0.97
NUP50-218ENST00000493456 NKX3-2P78367 333 aa21.14■□□□□ 0.97
NUP50-218ENST00000493456 GIMAP6Q6P9H5 292 aa21.14■□□□□ 0.97
NUP50-218ENST00000493456 ARMCX2Q7L311 632 aa21.14■□□□□ 0.97
NUP50-218ENST00000493456 PRDM12Q9H4Q4 367 aa21.14■□□□□ 0.97
NUP50-218ENST00000493456 MSRAQ9UJ68 235 aa21.14■□□□□ 0.97
NUP50-218ENST00000493456 SYNPO2Q9UMS6 1093 aa21.14■□□□□ 0.97
NUP50-218ENST00000493456 GRXCR1A8MXD5 290 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 COL9A1P20849 921 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 SLC4A3P48751 1232 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 ZNF365Q70YC5 407 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 SIRT2Q8IXJ6 389 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 HERVK_113Q902F9 699 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 KIFC2Q96AC6 838 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 FGD4Q96M96 766 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 PPP1R12CQ9BZL4 782 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 IL23AQ9NPF7 189 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 FEM1BQ9UK73 627 aa21.13■□□□□ 0.97
NUP50-218ENST00000493456 TRANK1O15050 2925 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 CD4P01730 458 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 IRX5P78411 483 aaPredicted RBP21.12■□□□□ 0.97
NUP50-218ENST00000493456 HNRNPUQ00839 825 aaKnown RBP eCLIP21.12■□□□□ 0.97
NUP50-218ENST00000493456 PPM1EQ8WY54 764 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 ASB2Q96Q27 587 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 STRBPQ96SI9 672 aaKnown RBP21.12■□□□□ 0.97
NUP50-218ENST00000493456 ZNF287Q9HBT7 754 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 RAVER2Q9HCJ3 691 aaKnown RBP21.12■□□□□ 0.97
NUP50-218ENST00000493456 CLIP2Q9UDT6 1046 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 DDX19BQ9UMR2 479 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 BDP1A6H8Y1 2624 aa21.12■□□□□ 0.97
NUP50-218ENST00000493456 IGKV6D-41A0A0C4DH26 115 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 CABYRO75952 493 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 FDX1P10109 184 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 ACRP10323 421 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 CCDC144CPQ8IYA2 1237 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 MKL1Q969V6 931 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 SEZ6LQ9BYH1 1024 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 KATNBL1Q9H079 304 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 ZBTB40Q9NUA8 1239 aa21.11■□□□□ 0.97
NUP50-218ENST00000493456 GSG1L2A8MUP6 293 aa21.1■□□□□ 0.97
NUP50-218ENST00000493456 CTAGE5O15320 804 aa21.1■□□□□ 0.97
NUP50-218ENST00000493456 MRPS5P82675 430 aaKnown RBP21.1■□□□□ 0.97
NUP50-218ENST00000493456 SLC43A3Q8NBI5 491 aa21.1■□□□□ 0.97
NUP50-218ENST00000493456 GMCL1P1Q8NEA9 526 aa21.1■□□□□ 0.97
NUP50-218ENST00000493456 MYH4Q9Y623 1939 aa21.1■□□□□ 0.97
NUP50-218ENST00000493456 MCM3APO60318 1980 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 MINDY4BA8MYZ0 360 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 CYP2C18P33260 490 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 IL27Q8NEV9 243 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 ADAMTS19Q8TE59 1207 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 HIPK3Q9H422 1215 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 CHMP4BQ9H444 224 aaKnown RBP21.09■□□□□ 0.97
NUP50-218ENST00000493456 ACAD9Q9H845 621 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 SLC28A3Q9HAS3 691 aa21.09■□□□□ 0.97
NUP50-218ENST00000493456 TTLL1O95922 423 aa21.08■□□□□ 0.97
NUP50-218ENST00000493456 FGBP02675 491 aa21.08■□□□□ 0.97
NUP50-218ENST00000493456 TNFAIP2Q03169 654 aa21.08■□□□□ 0.97
NUP50-218ENST00000493456 ADGRE1Q14246 886 aa21.08■□□□□ 0.97
NUP50-218ENST00000493456 ZNF444Q8N0Y2 327 aaPredicted RBP21.08■□□□□ 0.97
NUP50-218ENST00000493456 STK11IPQ8N1F8 1099 aa21.08■□□□□ 0.97
NUP50-218ENST00000493456 CEP95Q96GE4 821 aa21.08■□□□□ 0.97
NUP50-218ENST00000493456 MTMR4Q9NYA4 1195 aa21.08■□□□□ 0.97
NUP50-218ENST00000493456 CXXC1Q9P0U4 656 aaPredicted RBP21.08■□□□□ 0.97
NUP50-218ENST00000493456 ASB14A6NK59 587 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 IGFBP4P22692 258 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 BEX3Q00994 111 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 NOL8Q76FK4 1167 aaKnown RBP21.07■□□□□ 0.96
NUP50-218ENST00000493456 TLK2Q86UE8 772 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 FAM133AQ8N9E0 248 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 UHRF1Q96T88 793 aaPredicted RBP21.07■□□□□ 0.96
NUP50-218ENST00000493456 LRRCC1Q9C099 1032 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 HOMER2Q9NSB8 354 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 GNEQ9Y223 722 aaKnown RBP21.07■□□□□ 0.96
NUP50-218ENST00000493456 PLIN4Q96Q06 1357 aa21.07■□□□□ 0.96
NUP50-218ENST00000493456 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.06■□□□□ 0.96
NUP50-218ENST00000493456 ZEB2O60315 1214 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 BMP3P12645 472 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 GNAT2P19087 354 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 STAT2P52630 851 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 CNTN2Q02246 1040 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 ITGA7Q13683 1181 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 FSCN1Q16658 493 aaKnown RBP21.06■□□□□ 0.96
NUP50-218ENST00000493456 CXCL17Q6UXB2 119 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 APPBP2Q92624 585 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 TSPYL2Q9H2G4 693 aaPredicted RBP21.06■□□□□ 0.96
NUP50-218ENST00000493456 NKX2-4Q9H2Z4 354 aa21.06■□□□□ 0.96
NUP50-218ENST00000493456 ASTN1O14525 1302 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 LRRC37A2A6NM11 1700 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 TDO2P48775 406 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 CCDC85BQ15834 202 aaPredicted RBP21.05■□□□□ 0.96
NUP50-218ENST00000493456 TKFCQ3LXA3 575 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 SLFN13Q68D06 897 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 LRRC47Q8N1G4 583 aaKnown RBP21.05■□□□□ 0.96
NUP50-218ENST00000493456 KBTBD3Q8NAB2 608 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 OSBP2Q969R2 916 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 A1CFQ9NQ94 594 aaKnown RBP21.05■□□□□ 0.96
NUP50-218ENST00000493456 ECHDC1Q9NTX5 307 aa21.05■□□□□ 0.96
NUP50-218ENST00000493456 YBX2Q9Y2T7 364 aaKnown RBP21.05■□□□□ 0.96
NUP50-218ENST00000493456 COG6Q9Y2V7 657 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms