RNA–Protein interactions for RNA: ENST00000490564.1

NINJ1-205, Transcript of ninjurin 1, humanhuman

TSL 1 (best)

Gene NINJ1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NINJ1-205ENST00000490564 AGBL1Q96MI9 1066 aa12.28□□□□□ -0.44
NINJ1-205ENST00000490564 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
NINJ1-205ENST00000490564 TINF2Q9BSI4 451 aa12.28□□□□□ -0.44
NINJ1-205ENST00000490564 NRBP1Q9UHY1 535 aa12.28□□□□□ -0.44
NINJ1-205ENST00000490564 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
NINJ1-205ENST00000490564 MYH6P13533 1939 aa12.28□□□□□ -0.44
NINJ1-205ENST00000490564 TNKSO95271 1327 aa12.28□□□□□ -0.44
NINJ1-205ENST00000490564 FRMPD2Q68DX3 1309 aaPredicted RBP12.28□□□□□ -0.44
NINJ1-205ENST00000490564 CEP290O15078 2479 aa12.28□□□□□ -0.44
NINJ1-205ENST00000490564 MCM3APO60318 1980 aa12.27□□□□□ -0.44
NINJ1-205ENST00000490564 SEPT4O43236 478 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 TAL1P17542 331 aaPredicted RBP12.27□□□□□ -0.45
NINJ1-205ENST00000490564 COL9A3Q14050 684 aaPredicted RBP12.27□□□□□ -0.45
NINJ1-205ENST00000490564 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 SYDE2Q5VT97 1194 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 CCDC174Q6PII3 467 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 MAMDC4Q6UXC1 1216 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 ZNF467Q7Z7K2 595 aaPredicted RBP12.27□□□□□ -0.45
NINJ1-205ENST00000490564 ANKRD35Q8N283 1001 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 ENAHQ8N8S7 591 aaPredicted RBP12.27□□□□□ -0.45
NINJ1-205ENST00000490564 PNMA1Q8ND90 353 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 DPF3Q92784 378 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 MAP4K1Q92918 833 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 DDX11Q96FC9 970 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 C11orf49Q9H6J7 331 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 ACAD9Q9H845 621 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 RNF146Q9NTX7 359 aa12.27□□□□□ -0.45
NINJ1-205ENST00000490564 ICAM1P05362 532 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 COL6A1P12109 1028 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 ALAS1P13196 640 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 SLC16A2P36021 539 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 SNAP25P60880 206 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 PRAMEF19Q5SWL8 479 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 GPATCH4Q5T3I0 446 aaKnown RBP12.26□□□□□ -0.45
NINJ1-205ENST00000490564 CCDC136Q96JN2 1154 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 FGD4Q96M96 766 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 TRERF1Q96PN7 1200 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 UBAC1Q9BSL1 405 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 KAT14Q9H8E8 782 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 GPCPD1Q9NPB8 672 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 HOMER2Q9NSB8 354 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 PFASO15067 1338 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 SYNGAP1Q96PV0 1343 aa12.26□□□□□ -0.45
NINJ1-205ENST00000490564 ZNF865P0CJ78 1059 aaPredicted RBP12.25□□□□□ -0.45
NINJ1-205ENST00000490564 TRDNQ13061 729 aa12.25□□□□□ -0.45
NINJ1-205ENST00000490564 SEC23AQ15436 765 aa12.25□□□□□ -0.45
NINJ1-205ENST00000490564 CYB5R4Q7L1T6 521 aa12.25□□□□□ -0.45
NINJ1-205ENST00000490564 FAM133AQ8N9E0 248 aa12.25□□□□□ -0.45
NINJ1-205ENST00000490564 ESYT1Q9BSJ8 1104 aa12.25□□□□□ -0.45
NINJ1-205ENST00000490564 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
NINJ1-205ENST00000490564 A1CFQ9NQ94 594 aaKnown RBP12.25□□□□□ -0.45
NINJ1-205ENST00000490564 CCPG1Q9ULG6 757 aa12.25□□□□□ -0.45
NINJ1-205ENST00000490564 RBM8AQ9Y5S9 174 aaKnown RBP12.25□□□□□ -0.45
NINJ1-205ENST00000490564 E7EWF7 191 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 H0YGN5 161 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 DNM1LO00429 736 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 SNAI1O95863 264 aaPredicted RBP12.24□□□□□ -0.45
NINJ1-205ENST00000490564 GOLGA8HP0CJ92 632 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 ASPRV1Q53RT3 343 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 MUM1L1Q5H9M0 696 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 IFIT1BQ5T764 474 aaKnown RBP12.24□□□□□ -0.45
NINJ1-205ENST00000490564 STOX1Q6ZVD7 989 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 NCOA7Q8NI08 942 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 PNMA2Q9UL42 364 aa12.24□□□□□ -0.45
NINJ1-205ENST00000490564 WDR19Q8NEZ3 1342 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 POTEB2H3BUK9 544 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 EVI5O60447 810 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 AKR1A1P14550 325 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 ANO1Q5XXA6 986 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 CYP39A1Q9NYL5 469 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 CNPY2Q9Y2B0 182 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 NR2E3Q9Y5X4 410 aa12.23□□□□□ -0.45
NINJ1-205ENST00000490564 SOWAHBA6NEL2 793 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 NEFLP07196 543 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 PARP1P09874 1014 aaKnown RBP12.22□□□□□ -0.45
NINJ1-205ENST00000490564 CNTN2Q02246 1040 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 ARMCX2Q7L311 632 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 RALYLQ86SE5 291 aaKnown RBP12.22□□□□□ -0.45
NINJ1-205ENST00000490564 MB21D2Q8IYB1 491 aaPredicted RBP12.22□□□□□ -0.45
NINJ1-205ENST00000490564 ARRDC4Q8NCT1 418 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 KATNBL1Q9H079 304 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 ABHD16BQ9H3Z7 469 aa12.22□□□□□ -0.45
NINJ1-205ENST00000490564 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.22□□□□□ -0.45
NINJ1-205ENST00000490564 ASTN1O14525 1302 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 ERICH2A1L162 156 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 ASB14A6NK59 587 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 NFIBO00712 420 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.45
NINJ1-205ENST00000490564 RARBP10826 455 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 ANTXR2P58335 489 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 ACVR2BQ13705 512 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 WTAPQ15007 396 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 SART3Q15020 963 aaKnown RBP12.21□□□□□ -0.45
NINJ1-205ENST00000490564 NECTIN1Q15223 517 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 LRRC41Q15345 812 aa12.21□□□□□ -0.45
NINJ1-205ENST00000490564 CDC37Q16543 378 aaPredicted RBP12.21□□□□□ -0.45
NINJ1-205ENST00000490564 GJC2Q5T442 439 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms