RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 LRRC47Q8N1G4 583 aaKnown RBP7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 OXR1Q8N573 874 aa7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 MBNL3Q9NUK0 354 aaKnown RBP7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 GPR55Q9Y2T6 319 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 OAS3Q9Y6K5 1087 aaKnown RBP7.38□□□□□ -1.23
HMGB1P38-201ENST00000490557 STXBP3O00186 592 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 RNASE1P07998 156 aaKnown RBP7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 SEPHS1P49903 392 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 SSRP1Q08945 709 aaKnown RBP7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 GTF2IRD2BQ6EKJ0 949 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 DPH6Q7L8W6 267 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 GTF2IRD2Q86UP8 949 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 KSR1Q8IVT5 923 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 TRIM59Q8IWR1 403 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 FCRL2Q96LA5 508 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 SLC12A9Q9BXP2 914 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 ADAMTS10Q9H324 1103 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 PFDN2Q9UHV9 154 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 ADAMTS6Q9UKP5 1117 aa7.37□□□□□ -1.23
HMGB1P38-201ENST00000490557 GDNFP39905 211 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 KCNJ6P48051 423 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 HSP90AA2PQ14568 343 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 RASA3Q14644 834 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 SLC14A2Q15849 920 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 SPPL2CQ8IUH8 684 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 ZNF513Q8N8E2 541 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 ZNF669Q96BR6 464 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 SGSM3Q96HU1 749 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 FCRL3Q96P31 734 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 LGR4Q9BXB1 951 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 CDK11AQ9UQ88 783 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 BACE2Q9Y5Z0 518 aa7.36□□□□□ -1.23
HMGB1P38-201ENST00000490557 TMEM82A0PJX8 343 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 C2orf71A6NGG8 1288 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 BIN1O00499 593 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 AURKAO14965 403 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 IFNGR1P15260 489 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 IRAK1P51617 712 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 CHRNEQ04844 493 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 EEF1DP3Q658K8 133 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 CYP2R1Q6VVX0 501 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 ZPBP2Q6X784 338 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 PDZD8Q8NEN9 1154 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 BTN2A2Q8WVV5 523 aa7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 IPO9Q96P70 1041 aaKnown RBP7.35□□□□□ -1.23
HMGB1P38-201ENST00000490557 A0A1W2PQU0 124 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 FITM1A5D6W6 292 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 FAM221BA6H8Z2 402 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 TBC1D8O95759 1140 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 SNRPB2P08579 225 aaKnown RBP7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 ZGLP1P0C6A0 271 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 AFMP43652 599 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 PPP2R2AP63151 447 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 RCSD1Q6JBY9 416 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 SPATC1Q76KD6 591 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 JAMLQ86YT9 394 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 ANKS4BQ8N8V4 417 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 MAP6Q96JE9 813 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 MRGPRX3Q96LB0 322 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 CCDC140Q96MF4 163 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 DNAJC7Q99615 494 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 AARSD1Q9BTE6 412 aaKnown RBP7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 NKX2-4Q9H2Z4 354 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 TNFRSF10DQ9UBN6 386 aa7.34□□□□□ -1.23
HMGB1P38-201ENST00000490557 KDM2BQ8NHM5 1336 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 A0A1W2PQ27 194 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 A0A1W2PQ64 194 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 A0A1W2PQC6 194 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 A0A1W2PQD8 194 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 USP2O75604 605 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 HOXC12P31275 282 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 ECI1P42126 302 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 KIR2DL1P43626 348 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 KIR2DL2P43627 348 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 SCRN1Q12765 414 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 RTP2Q5QGT7 225 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 PTCHD1Q96NR3 888 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 CDC6Q99741 560 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 CYP26B1Q9NR63 512 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 ERVK13-1Q9NX77 482 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 CTNND2Q9UQB3 1225 aa7.33□□□□□ -1.24
HMGB1P38-201ENST00000490557 TRBV23OR9-2A0A075B6M9 112 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 TRAV20A0A0B4J274 112 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 FGF10O15520 208 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 TBX1O43435 398 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 CPP00450 1065 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 HLA-DQA1Q5Y7H0 255 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 MYLIPQ8WY64 445 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 MCMBPQ9BTE3 642 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
HMGB1P38-201ENST00000490557 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 PAMP19021 973 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 RTP1P59025 263 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 LAPTM5Q13571 262 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 ATG4DQ86TL0 474 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 LINC01599Q8WXQ3 324 aa7.31□□□□□ -1.24
HMGB1P38-201ENST00000490557 KCTD13Q8WZ19 329 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms