RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 DSCC1Q9BVC3 393 aa7.52□□□□□ -1.21
SMC4-219ENST00000487747 HRKO00198 91 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 GSTM1P09488 218 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 MSL3P1P0C860 447 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 ZNF445P59923 1031 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 TMCO4Q5TGY1 634 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 NUP43Q8NFH3 380 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 SIGLEC10Q96LC7 697 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 PRR13Q9NZ81 148 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 IMPACTQ9P2X3 320 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 DDX41Q9UJV9 622 aaKnown RBP7.51□□□□□ -1.21
SMC4-219ENST00000487747 ACSL6Q9UKU0 697 aa7.51□□□□□ -1.21
SMC4-219ENST00000487747 A0A1W2PQ45 241 aaPredicted RBP7.5□□□□□ -1.21
SMC4-219ENST00000487747 A0A1W2PQY0 241 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 NUDT19A8MXV4 375 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 N4BP3O15049 544 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 GSNP06396 782 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 CYP4F8P98187 520 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 ZNF385BQ569K4 471 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 CCDC81Q6ZN84 652 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 TMEFF1Q8IYR6 380 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 TAB3Q8N5C8 712 aaPredicted RBP7.5□□□□□ -1.21
SMC4-219ENST00000487747 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 TNFRSF12AQ9NP84 129 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 PARD6AQ9NPB6 346 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 IRAK3Q9Y616 596 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 LTBP3Q9NS15 1303 aa7.5□□□□□ -1.21
SMC4-219ENST00000487747 TRIM13O60858 407 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 MPOP05164 745 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 IMPDH2P12268 514 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 MVKQ03426 396 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 RAB3GAP1Q15042 981 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 VMACQ2NL98 169 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 TCERG1LQ5VWI1 586 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 TMC6Q7Z403 805 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 LSRQ86X29 649 aaPredicted RBP7.49□□□□□ -1.21
SMC4-219ENST00000487747 IGDCC3Q8IVU1 814 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 MZB1Q8WU39 189 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 DACT3Q96B18 629 aaPredicted RBP7.49□□□□□ -1.21
SMC4-219ENST00000487747 KCNC2Q96PR1 638 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 TM9SF2Q99805 663 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 BCL11AQ9H165 835 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 METTL5Q9NRN9 209 aaKnown RBP7.49□□□□□ -1.21
SMC4-219ENST00000487747 RAPGEFL1Q9UHV5 662 aa7.49□□□□□ -1.21
SMC4-219ENST00000487747 A0A0G2JLL6 359 aaPredicted RBP7.48□□□□□ -1.21
SMC4-219ENST00000487747 IRS4O14654 1257 aaPredicted RBP7.48□□□□□ -1.21
SMC4-219ENST00000487747 GUCY2CP25092 1073 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 NCKAP1LP55160 1127 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 CTSWP56202 376 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 ANKRD39Q53RE8 183 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 LCE5AQ5TCM9 118 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 RPTNQ6XPR3 784 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 LDHDQ86WU2 507 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 MARCH10Q8NA82 808 aaPredicted RBP7.48□□□□□ -1.21
SMC4-219ENST00000487747 RBBP8NLQ8NC74 664 aaPredicted RBP7.48□□□□□ -1.21
SMC4-219ENST00000487747 RNF34Q969K3 372 aa7.48□□□□□ -1.21
SMC4-219ENST00000487747 RFXAPO00287 272 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 RECKO95980 971 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 CD247P20963 164 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 LAPTM5Q13571 262 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 NOL9Q5SY16 702 aaKnown RBP7.47□□□□□ -1.21
SMC4-219ENST00000487747 FIBCD1Q8N539 461 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 FCRL3Q96P31 734 aaPredicted RBP7.47□□□□□ -1.21
SMC4-219ENST00000487747 ZCCHC4Q9H5U6 513 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 GINM1Q9NU53 330 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 PLA2G2DQ9UNK4 145 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 HCFC2Q9Y5Z7 792 aa7.47□□□□□ -1.21
SMC4-219ENST00000487747 B8ZZF3 427 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 PRRG2O14669 202 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 CBFA2T2O43439 604 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 IFNGR1P15260 489 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 ENDOUP21128 410 aaKnown RBP7.46□□□□□ -1.22
SMC4-219ENST00000487747 ARL4AP40617 200 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 BUD31P41223 144 aaPredicted RBP7.46□□□□□ -1.22
SMC4-219ENST00000487747 MFAP1P55081 439 aaKnown RBP7.46□□□□□ -1.22
SMC4-219ENST00000487747 FAM129CQ86XR2 697 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 NAT16Q8N8M0 369 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 NOL6Q9H6R4 1146 aaKnown RBP7.46□□□□□ -1.22
SMC4-219ENST00000487747 ZNF214Q9UL59 606 aaPredicted RBP7.46□□□□□ -1.22
SMC4-219ENST00000487747 PCDHA5Q9Y5H7 936 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 FHOD1Q9Y613 1164 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 NCANO14594 1321 aa7.46□□□□□ -1.22
SMC4-219ENST00000487747 ABLIM1O14639 778 aa7.45□□□□□ -1.22
SMC4-219ENST00000487747 FGF10O15520 208 aaPredicted RBP7.45□□□□□ -1.22
SMC4-219ENST00000487747 AFF3P51826 1226 aaKnown RBP7.45□□□□□ -1.22
SMC4-219ENST00000487747 PAK2Q13177 524 aa7.45□□□□□ -1.22
SMC4-219ENST00000487747 CBX2Q14781 532 aaPredicted RBP7.45□□□□□ -1.22
SMC4-219ENST00000487747 CWF19L1Q69YN2 538 aaKnown RBP7.45□□□□□ -1.22
SMC4-219ENST00000487747 METTL16Q86W50 562 aaKnown RBP7.45□□□□□ -1.22
SMC4-219ENST00000487747 SMARCC1Q92922 1105 aaPredicted RBP7.45□□□□□ -1.22
SMC4-219ENST00000487747 SRRTQ9BXP5 876 aaKnown RBP7.45□□□□□ -1.22
SMC4-219ENST00000487747 PCDHB10Q9UN67 800 aa7.45□□□□□ -1.22
SMC4-219ENST00000487747 PLEKHN1Q494U1 663 aaPredicted RBP7.44□□□□□ -1.22
SMC4-219ENST00000487747 CNKSR3Q6P9H4 555 aa7.44□□□□□ -1.22
SMC4-219ENST00000487747 ZDHHC15Q96MV8 337 aa7.44□□□□□ -1.22
SMC4-219ENST00000487747 MCMBPQ9BTE3 642 aa7.44□□□□□ -1.22
SMC4-219ENST00000487747 EFR3BQ9Y2G0 817 aa7.44□□□□□ -1.22
SMC4-219ENST00000487747 ZNF200P98182 395 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms