RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MFAP3LO75121 409 aa29.45■■■□□ 2.31
HLA-C-208ENST00000487245 CLCN6P51797 869 aa29.45■■■□□ 2.31
HLA-C-208ENST00000487245 RBL2Q08999 1139 aa29.45■■■□□ 2.31
HLA-C-208ENST00000487245 RRP36Q96EU6 259 aaKnown RBP29.45■■■□□ 2.31
HLA-C-208ENST00000487245 CARD6Q9BX69 1037 aa29.45■■■□□ 2.31
HLA-C-208ENST00000487245 QTRT2Q9H974 415 aaKnown RBP29.45■■■□□ 2.31
HLA-C-208ENST00000487245 LTBP1Q14766 1721 aa29.45■■■□□ 2.3
HLA-C-208ENST00000487245 GNA11P29992 359 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 ZNF658Q5TYW1 1059 aaPredicted RBP29.44■■■□□ 2.3
HLA-C-208ENST00000487245 CNGA4Q8IV77 575 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 C6orf50Q9HD87 102 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 CTNND2Q9UQB3 1225 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 ATP6V0A2Q9Y487 856 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 MYL1P05976 194 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 RASGRP4Q8TDF6 673 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 MTRQ99707 1265 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 ADGRG1Q9Y653 693 aa29.44■■■□□ 2.3
HLA-C-208ENST00000487245 PLIN4Q96Q06 1357 aa29.43■■■□□ 2.3
HLA-C-208ENST00000487245 FOCADQ5VW36 1801 aa29.43■■■□□ 2.3
HLA-C-208ENST00000487245 STAT6P42226 847 aa29.43■■■□□ 2.3
HLA-C-208ENST00000487245 CCSER1Q9C0I3 900 aa29.43■■■□□ 2.3
HLA-C-208ENST00000487245 SEC63Q9UGP8 760 aaKnown RBP29.43■■■□□ 2.3
HLA-C-208ENST00000487245 DAGLAQ9Y4D2 1042 aa29.43■■■□□ 2.3
HLA-C-208ENST00000487245 hCG_1984214I3L0E3 225 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 KIF20AO95235 890 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 NAPAP54920 295 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 FAM193AP78312 1265 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 RRAGBQ5VZM2 374 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 SMYD4Q8IYR2 804 aaPredicted RBP29.42■■■□□ 2.3
HLA-C-208ENST00000487245 ZNF713Q8N859 430 aaPredicted RBP29.42■■■□□ 2.3
HLA-C-208ENST00000487245 PKNOX2Q96KN3 472 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 DISC1Q9NRI5 854 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 GTF2IP78347 998 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 PAK1Q13153 545 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 ORC2Q13416 577 aaPredicted RBP29.42■■■□□ 2.3
HLA-C-208ENST00000487245 INF2Q27J81 1249 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 SOGA3Q5TF21 947 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 RASGRP2Q7LDG7 609 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 KRT27Q7Z3Y8 459 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 CEP95Q96GE4 821 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 MRPL44Q9H9J2 332 aaKnown RBP29.42■■■□□ 2.3
HLA-C-208ENST00000487245 MTMR7Q9Y216 660 aa29.42■■■□□ 2.3
HLA-C-208ENST00000487245 ATP8B1O43520 1251 aa29.41■■■□□ 2.3
HLA-C-208ENST00000487245 ZRANB2O95218 330 aaKnown RBP eCLIP29.41■■■□□ 2.3
HLA-C-208ENST00000487245 RPN1P04843 607 aaKnown RBP29.41■■■□□ 2.3
HLA-C-208ENST00000487245 TRIM14Q14142 442 aa29.41■■■□□ 2.3
HLA-C-208ENST00000487245 RAD9BQ6WBX8 426 aa29.41■■■□□ 2.3
HLA-C-208ENST00000487245 AK8Q96MA6 479 aa29.41■■■□□ 2.3
HLA-C-208ENST00000487245 SOWAHDA6NJG2 315 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 GOLGA8HP0CJ92 632 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 NONOQ15233 471 aaKnown RBP eCLIP29.4■■■□□ 2.3
HLA-C-208ENST00000487245 KRT31Q15323 416 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 RSRC2Q7L4I2 434 aaKnown RBP29.4■■■□□ 2.3
HLA-C-208ENST00000487245 DESI2Q9BSY9 194 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 BLZF1Q9H2G9 400 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 ESYT2A0FGR8 921 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 UBA7P41226 1012 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 STAMQ92783 540 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 CUEDC2Q9H467 287 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 MAGEF1Q9HAY2 307 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 FHOD1Q9Y613 1164 aa29.4■■■□□ 2.3
HLA-C-208ENST00000487245 SMCO2A6NFE2 343 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 TRIM37O94972 964 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 GYPCP04921 128 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 PPP2R3AQ06190 1150 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 TUBB2AQ13885 445 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 MTF1Q14872 753 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 GPR161Q8N6U8 529 aaKnown RBP29.39■■■□□ 2.3
HLA-C-208ENST00000487245 ANKRD20A12PQ8NF67 263 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 TUBB2BQ9BVA1 445 aa29.39■■■□□ 2.3
HLA-C-208ENST00000487245 ZC3H12CQ9C0D7 883 aaKnown RBP29.39■■■□□ 2.3
HLA-C-208ENST00000487245 COPB1P53618 953 aaKnown RBP29.38■■■□□ 2.29
HLA-C-208ENST00000487245 USP17L2Q6R6M4 530 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 TMTC1Q8IUR5 882 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 NLGN1Q8N2Q7 840 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 TMEM60Q9H2L4 133 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 RIOX1Q9H6W3 641 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 NPR1P16066 1061 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 GABPAQ06546 454 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 KCNB1Q14721 858 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 KARSQ15046 597 aaKnown RBP29.38■■■□□ 2.29
HLA-C-208ENST00000487245 TXNRD1Q16881 649 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 NELFBQ8WX92 580 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 SWAP70Q9UH65 585 aa29.38■■■□□ 2.29
HLA-C-208ENST00000487245 MYO3BQ8WXR4 1341 aa29.37■■■□□ 2.29
HLA-C-208ENST00000487245 CASP14P31944 242 aa29.37■■■□□ 2.29
HLA-C-208ENST00000487245 ASPRV1Q53RT3 343 aa29.37■■■□□ 2.29
HLA-C-208ENST00000487245 TCP11X2Q5H9J9 407 aa29.37■■■□□ 2.29
HLA-C-208ENST00000487245 TMCO3Q6UWJ1 677 aa29.37■■■□□ 2.29
HLA-C-208ENST00000487245 CREBRFQ8IUR6 639 aa29.37■■■□□ 2.29
HLA-C-208ENST00000487245 H7C1D1 291 aa29.36■■■□□ 2.29
HLA-C-208ENST00000487245 ALDH1B1P30837 517 aa29.36■■■□□ 2.29
HLA-C-208ENST00000487245 RASSF8Q8NHQ8 419 aa29.36■■■□□ 2.29
HLA-C-208ENST00000487245 RABGGTAQ92696 567 aa29.36■■■□□ 2.29
HLA-C-208ENST00000487245 MTMR4Q9NYA4 1195 aa29.36■■■□□ 2.29
HLA-C-208ENST00000487245 TTF2Q9UNY4 1162 aaKnown RBP29.36■■■□□ 2.29
HLA-C-208ENST00000487245 QSER1Q2KHR3 1735 aa29.36■■■□□ 2.29
HLA-C-208ENST00000487245 N4BP3O15049 544 aa29.36■■■□□ 2.29
HLA-C-208ENST00000487245 PNMA6AP0CW24 399 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-208ENST00000487245 RIMBP2O15034 1052 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms