RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 LRRC47Q8N1G4 583 aaKnown RBP8.79□□□□□ -1
CPNE1-226ENST00000486021 GLT1D1Q96MS3 346 aa8.79□□□□□ -1
CPNE1-226ENST00000486021 TRERF1Q96PN7 1200 aa8.79□□□□□ -1
CPNE1-226ENST00000486021 DSCC1Q9BVC3 393 aa8.79□□□□□ -1
CPNE1-226ENST00000486021 RAVER2Q9HCJ3 691 aaKnown RBP8.79□□□□□ -1
CPNE1-226ENST00000486021 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.79□□□□□ -1
CPNE1-226ENST00000486021 TACC3Q9Y6A5 838 aa8.79□□□□□ -1
CPNE1-226ENST00000486021 HTTP42858 3142 aa8.79□□□□□ -1
CPNE1-226ENST00000486021 RAD50Q92878 1312 aa8.79□□□□□ -1
CPNE1-226ENST00000486021 DCDC2CA8MYV0 355 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 CABYRO75952 493 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 CHGBP05060 677 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 ALAS1P13196 640 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 NMIQ13287 307 aaPredicted RBP8.78□□□□□ -1
CPNE1-226ENST00000486021 ACVR2BQ13705 512 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 SART3Q15020 963 aaKnown RBP8.78□□□□□ -1
CPNE1-226ENST00000486021 LRRC41Q15345 812 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 GJC2Q5T442 439 aaPredicted RBP8.78□□□□□ -1
CPNE1-226ENST00000486021 POTEEQ6S8J3 1075 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 CWC27Q6UX04 472 aaKnown RBP8.78□□□□□ -1
CPNE1-226ENST00000486021 CCDC129Q6ZRS4 1044 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 REPS2Q8NFH8 660 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 VTI1AQ96AJ9 217 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 NUP88Q99567 741 aaPredicted RBP8.78□□□□□ -1
CPNE1-226ENST00000486021 GDF15Q99988 308 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.78□□□□□ -1
CPNE1-226ENST00000486021 AP5M1Q9H0R1 490 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 KAT14Q9H8E8 782 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 RNF146Q9NTX7 359 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 ZHX1Q9UKY1 873 aaPredicted RBP8.78□□□□□ -1
CPNE1-226ENST00000486021 CCPG1Q9ULG6 757 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 ATP11BQ9Y2G3 1177 aa8.78□□□□□ -1
CPNE1-226ENST00000486021 DNAJC25-GNG10A0A024R161 153 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 ICAM1P05362 532 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 PGK2P07205 417 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 RTP1P59025 263 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 LRRC26Q2I0M4 334 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 LRIT3Q3SXY7 679 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 NOL8Q76FK4 1167 aaKnown RBP8.77□□□□□ -1.01
CPNE1-226ENST00000486021 PLEKHM2Q8IWE5 1019 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 OTUD7AQ8TE49 926 aaPredicted RBP8.77□□□□□ -1.01
CPNE1-226ENST00000486021 UBAC1Q9BSL1 405 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 STARD7Q9NQZ5 370 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 ZMYND8Q9ULU4 1186 aaPredicted RBP8.77□□□□□ -1.01
CPNE1-226ENST00000486021 PHF24Q9UPV7 400 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 Q9Y3F1 56 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 SUPT16HQ9Y5B9 1047 aaKnown RBP8.77□□□□□ -1.01
CPNE1-226ENST00000486021 ELP1O95163 1332 aa8.77□□□□□ -1.01
CPNE1-226ENST00000486021 A0A0D9SFI3 127 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 NKRFO15226 690 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 IGHA2P01877 340 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 SYN1P17600 705 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 CST5P28325 142 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 ADCYAP1R1P41586 468 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 MAGEA10P43363 369 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 NOVP48745 357 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 ATN1P54259 1190 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 ASPRV1Q53RT3 343 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 SYDE2Q5VT97 1194 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 IQSEC1Q6DN90 963 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 BTNL9Q6UXG8 535 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 KIAA1211Q6ZU35 1233 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 KCTD1Q719H9 257 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 ARMCX2Q7L311 632 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 MCF2L2Q86YR7 1114 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 SAMD3Q8N6K7 520 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 DNERQ8NFT8 737 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 EXOC6Q8TAG9 804 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 FAM227BQ96M60 508 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 TOX2Q96NM4 488 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 MTIF3Q9H2K0 278 aaKnown RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 VTA1Q9NP79 307 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 PRDM5Q9NQX1 630 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 GPHNQ9NQX3 736 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 HOMER2Q9NSB8 354 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 MAP3K20Q9NYL2 800 aaKnown RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 PRR12Q9ULL5 1215 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 U3KPZ7 1027 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-226ENST00000486021 KIAA1217Q5T5P2 1943 aa8.76□□□□□ -1.01
CPNE1-226ENST00000486021 LTBP2Q14767 1821 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 A0A0U1RQG5 324 aaPredicted RBP8.75□□□□□ -1.01
CPNE1-226ENST00000486021 PTPDC1A2A3K4 754 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 DHX16O60231 1041 aaKnown RBP8.75□□□□□ -1.01
CPNE1-226ENST00000486021 CLTBP09497 229 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 C6orf222P0C671 652 aaPredicted RBP8.75□□□□□ -1.01
CPNE1-226ENST00000486021 ZNF865P0CJ78 1059 aaPredicted RBP8.75□□□□□ -1.01
CPNE1-226ENST00000486021 RAG1P15918 1043 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 TNFAIP2Q03169 654 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 SNX17Q15036 470 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 CCDC144BQ3MJ40 725 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 GNASQ5JWF2 1037 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 PRAMEF19Q5SWL8 479 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 ANO1Q5XXA6 986 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 CASC1Q6TDU7 716 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 NSMFQ6X4W1 530 aa8.75□□□□□ -1.01
CPNE1-226ENST00000486021 RALYLQ86SE5 291 aaKnown RBP8.75□□□□□ -1.01
CPNE1-226ENST00000486021 TRPV1Q8NER1 839 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms