RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.56□□□□□ -1.841e-8■■■■□ 23.7
ITGB1-213ENST00000484088 EPB41L4AQ9HCS5 686 aaPredicted RBP3.56□□□□□ -1.84
ITGB1-213ENST00000484088 APEX2Q9UBZ4 518 aa3.56□□□□□ -1.84
ITGB1-213ENST00000484088 ZNF451Q9Y4E5 1061 aa3.56□□□□□ -1.84
ITGB1-213ENST00000484088 PDPK1O15530 556 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 SUSD5O60279 629 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 EPHX1P07099 455 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 MED14OSP0DP75 135 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 SLC7A5Q01650 507 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 CYP4F3Q08477 520 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 NMIQ13287 307 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-213ENST00000484088 TMEM67Q5HYA8 995 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 RTP2Q5QGT7 225 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 KIAA1211LQ6NV74 962 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 SYDE1Q6ZW31 735 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-213ENST00000484088 NLRX1Q86UT6 975 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 PDZD8Q8NEN9 1154 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 BHLHE22Q8NFJ8 381 aaPredicted RBP3.55□□□□□ -1.84
ITGB1-213ENST00000484088 ABHD4Q8TB40 342 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 MYLIPQ8WY64 445 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 RNPC3Q96LT9 517 aaKnown RBP3.55□□□□□ -1.84
ITGB1-213ENST00000484088 DIRC2Q96SL1 478 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 DNAJC7Q99615 494 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 HAUS7Q99871 368 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 LGR4Q9BXB1 951 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 FOXP3Q9BZS1 431 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 MCOLN1Q9GZU1 580 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 NSUN3Q9H649 340 aaKnown RBP3.55□□□□□ -1.84
ITGB1-213ENST00000484088 ZMYM5Q9UJ78 669 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 SLC12A7Q9Y666 1083 aa3.55□□□□□ -1.84
ITGB1-213ENST00000484088 ETV2O00321 342 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-213ENST00000484088 TBX1O43435 398 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 CLEC3AO75596 197 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 SQSTM1Q13501 440 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 AUHQ13825 339 aaKnown RBP3.54□□□□□ -1.84
ITGB1-213ENST00000484088 NCAPHQ15003 741 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 GNPTABQ3T906 1256 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 FBLN7Q53RD9 439 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 DAGLBQ8NCG7 672 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 LINC00116Q8NCU8 138 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 ST13P5Q8NFI4 369 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-213ENST00000484088 ZNF669Q96BR6 464 aaPredicted RBP3.54□□□□□ -1.84
ITGB1-213ENST00000484088 DHRS1Q96LJ7 313 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 SRPK1Q96SB4 655 aaKnown RBP3.54□□□□□ -1.84
ITGB1-213ENST00000484088 MCMBPQ9BTE3 642 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 TRIM55Q9BYV6 548 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 FAM86C1Q9NVL1 165 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 GPATCH2Q9NW75 528 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 PLA2G2DQ9UNK4 145 aa3.54□□□□□ -1.84
ITGB1-213ENST00000484088 YBX2Q9Y2T7 364 aaKnown RBP3.54□□□□□ -1.84
ITGB1-213ENST00000484088 MRPL42Q9Y6G3 142 aaKnown RBP3.54□□□□□ -1.84
ITGB1-213ENST00000484088 TLDC2A0PJX2 215 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 FADS2P1A8MWK0 482 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 SIGLEC6O43699 453 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 SMARCA5O60264 1052 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-213ENST00000484088 USP2O75604 605 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-213ENST00000484088 DDAH1O94760 285 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 TP53P04637 393 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-213ENST00000484088 CD247P20963 164 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 SDHBP21912 280 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 GBP1P32455 592 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 ZNF143P52747 638 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-213ENST00000484088 ZNF445P59923 1031 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 NFE2L2Q16236 605 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 FOXB2Q5VYV0 432 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 IRF2BP1Q8IU81 584 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 C7orf61Q8IZ16 206 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 SMARCC1Q92922 1105 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-213ENST00000484088 MAP6Q96JE9 813 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 MRGPRX3Q96LB0 322 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 TRIT1Q9H3H1 467 aaKnown RBP3.53□□□□□ -1.84
ITGB1-213ENST00000484088 ZNF552Q9H707 407 aaPredicted RBP3.53□□□□□ -1.84
ITGB1-213ENST00000484088 GP6Q9HCN6 339 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 ARHGEF4Q9NR80 690 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 KCNH3Q9ULD8 1083 aa3.53□□□□□ -1.84
ITGB1-213ENST00000484088 A0A1W2PQU0 124 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ANKRD34BA5PLL1 514 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 CCDC85CA6NKD9 419 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ENPP3O14638 875 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 NRDCO43847 1150 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ZNF205O95201 554 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ITGAVP06756 1048 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 FAM153BP0C7A2 387 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 MSL3P1P0C860 447 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 LTKP29376 864 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 GRIA2P42262 883 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 RNF4P78317 190 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 TCEAL1Q15170 157 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 EEPD1Q7L9B9 569 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 SLCO6A1Q86UG4 719 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ZNF227Q86WZ6 799 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ARHGEF39Q8N4T4 335 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ENOX1Q8TC92 643 aaKnown RBP3.52□□□□□ -1.85
ITGB1-213ENST00000484088 INTS4Q96HW7 963 aaKnown RBP3.52□□□□□ -1.85
ITGB1-213ENST00000484088 SGPP1Q9BX95 441 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 SLC12A9Q9BXP2 914 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 ERVK13-1Q9NX77 482 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 GFOD1Q9NXC2 390 aa3.52□□□□□ -1.85
ITGB1-213ENST00000484088 FAM53CQ9NYF3 392 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms