RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ECE1P42892 770 aa16.02■□□□□ 0.16
CLK3-204ENST00000483723 SASS6Q6UVJ0 657 aa16.02■□□□□ 0.16
CLK3-204ENST00000483723 RNF214Q8ND24 703 aa16.02■□□□□ 0.16
CLK3-204ENST00000483723 SDF4Q9BRK5 362 aa16.02■□□□□ 0.16
CLK3-204ENST00000483723 CSRNP2Q9H175 543 aa16.02■□□□□ 0.16
CLK3-204ENST00000483723 DEFB129Q9H1M3 183 aa16.02■□□□□ 0.16
CLK3-204ENST00000483723 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.16
CLK3-204ENST00000483723 PLA2G6O60733 806 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 CAVIN2O95810 425 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 CLK2P49760 499 aaKnown RBP16.02■□□□□ 0.15
CLK3-204ENST00000483723 ADCY7P51828 1080 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 NONOQ15233 471 aaKnown RBP eCLIP16.02■□□□□ 0.155e-7■■□□□ 13.6
CLK3-204ENST00000483723 INF2Q27J81 1249 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 QRICH1Q2TAL8 776 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 KIAA1755Q5JYT7 1200 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 PPP1R9BQ96SB3 815 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 KIAA1468Q9P260 1216 aa16.02■□□□□ 0.15
CLK3-204ENST00000483723 MCM7P33993 719 aa16.01■□□□□ 0.15
CLK3-204ENST00000483723 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
CLK3-204ENST00000483723 IL17AQ16552 155 aa16.01■□□□□ 0.15
CLK3-204ENST00000483723 SYDE2Q5VT97 1194 aa16.01■□□□□ 0.15
CLK3-204ENST00000483723 KRBA2Q6ZNG9 492 aa16.01■□□□□ 0.15
CLK3-204ENST00000483723 REXO1Q8N1G1 1221 aaKnown RBP16.01■□□□□ 0.15
CLK3-204ENST00000483723 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
CLK3-204ENST00000483723 GLT8D2Q9H1C3 349 aa16.01■□□□□ 0.15
CLK3-204ENST00000483723 VCPKMTQ9H867 229 aa16.01■□□□□ 0.15
CLK3-204ENST00000483723 GOPCQ9HD26 462 aa16.01■□□□□ 0.15
CLK3-204ENST00000483723 SCAF8Q9UPN6 1271 aaKnown RBP16.01■□□□□ 0.15
CLK3-204ENST00000483723 TMEM232C9JQI7 657 aa16■□□□□ 0.15
CLK3-204ENST00000483723 LAD1O00515 517 aa16■□□□□ 0.15
CLK3-204ENST00000483723 CTNND1O60716 968 aaKnown RBP16■□□□□ 0.15
CLK3-204ENST00000483723 MRPL12P52815 198 aaKnown RBP16■□□□□ 0.15
CLK3-204ENST00000483723 CDC37Q16543 378 aaPredicted RBP16■□□□□ 0.15
CLK3-204ENST00000483723 LONRF3Q496Y0 759 aa16■□□□□ 0.15
CLK3-204ENST00000483723 SPECC1Q5M775 1068 aa16■□□□□ 0.15
CLK3-204ENST00000483723 APOBEC3FQ8IUX4 373 aaKnown RBP16■□□□□ 0.15
CLK3-204ENST00000483723 TRPM4Q8TD43 1214 aa16■□□□□ 0.15
CLK3-204ENST00000483723 SH2D4AQ9H788 454 aa16■□□□□ 0.15
CLK3-204ENST00000483723 BIN2Q9UBW5 565 aaPredicted RBP16■□□□□ 0.15
CLK3-204ENST00000483723 ZNF112Q9UJU3 913 aa16■□□□□ 0.15
CLK3-204ENST00000483723 EDIL3O43854 480 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 RAD21O60216 631 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 PRPHP41219 470 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 HIRAP54198 1017 aaPredicted RBP15.99■□□□□ 0.15
CLK3-204ENST00000483723 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
CLK3-204ENST00000483723 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 NEK8Q86SG6 692 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 FAM200AQ8TCP9 573 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 TUBE1Q9UJT0 475 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 YBX3P16989 372 aaKnown RBP eCLIP15.99■□□□□ 0.152e-6■■■□□ 18.1
CLK3-204ENST00000483723 EPS15P42566 896 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 ANO6Q4KMQ2 910 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 NBPF12Q5TAG4 269 aaPredicted RBP15.99■□□□□ 0.15
CLK3-204ENST00000483723 ANGEL2Q5VTE6 544 aaKnown RBP15.99■□□□□ 0.15
CLK3-204ENST00000483723 JAKMIP3Q5VZ66 844 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 CUL5Q93034 780 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 PDLIM2Q96JY6 352 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 AMNQ9BXJ7 453 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 TMEM260Q9NX78 707 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 PRR12Q9ULL5 1215 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 PCDHA1Q9Y5I3 950 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 PPP2R3BQ9Y5P8 575 aa15.99■□□□□ 0.15
CLK3-204ENST00000483723 CCDC173Q0VFZ6 552 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 STX1AQ16623 288 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 DCAF15Q66K64 600 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 TEX2Q8IWB9 1127 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 TBCKQ8TEA7 893 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 CHURC1Q8WUH1 139 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 HOOK2Q96ED9 719 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 TMEM60Q9H2L4 133 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 PSTPIP2Q9H939 334 aa15.98■□□□□ 0.15
CLK3-204ENST00000483723 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
CLK3-204ENST00000483723 POLR2DO15514 142 aaKnown RBP15.97■□□□□ 0.15
CLK3-204ENST00000483723 LONP1P36776 959 aaKnown RBP15.97■□□□□ 0.15
CLK3-204ENST00000483723 SPICE1Q8N0Z3 855 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 CNNM3Q8NE01 707 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 ANP32BQ92688 251 aaKnown RBP15.97■□□□□ 0.15
CLK3-204ENST00000483723 SYMPKQ92797 1274 aaKnown RBP15.97■□□□□ 0.15
CLK3-204ENST00000483723 EPSTI1Q96J88 318 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 ZNF341Q9BYN7 854 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 GLIS2Q9BZE0 524 aaPredicted RBP15.97■□□□□ 0.15
CLK3-204ENST00000483723 ANO10Q9NW15 660 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 PITPNM2Q9BZ72 1349 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 VWA3AA6NCI4 1184 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 ACTN4O43707 911 aaKnown RBP15.97■□□□□ 0.15
CLK3-204ENST00000483723 STAT2P52630 851 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 FAM83BQ5T0W9 1011 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 KANK3Q6NY19 840 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 FAM160B2Q86V87 743 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 KIAA1683Q9H0B3 1180 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 CBX8Q9HC52 389 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 USP25Q9UHP3 1055 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 SERTAD1Q9UHV2 236 aa15.97■□□□□ 0.15
CLK3-204ENST00000483723 A0A087X0B3 334 aa15.96■□□□□ 0.15
CLK3-204ENST00000483723 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
CLK3-204ENST00000483723 TRAF1Q13077 416 aa15.96■□□□□ 0.15
CLK3-204ENST00000483723 DOCK1Q14185 1865 aa15.96■□□□□ 0.15
CLK3-204ENST00000483723 IQCB1Q15051 598 aa15.96■□□□□ 0.15
CLK3-204ENST00000483723 MCTP2Q6DN12 878 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms