RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 PCP11498 1178 aaKnown RBP9.28□□□□□ -0.92
SORT1-205ENST00000483508 SFPQP23246 707 aaKnown RBP eCLIP9.28□□□□□ -0.92
SORT1-205ENST00000483508 TDO2P48775 406 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 PPIL2Q13356 520 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 RASGRF1Q13972 1273 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 NCAPHQ15003 741 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 CT47A1Q5JQC4 288 aaPredicted RBP9.28□□□□□ -0.92
SORT1-205ENST00000483508 FKBP1CQ5VVH2 108 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 KANK3Q6NY19 840 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 SHC4Q6S5L8 630 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 KRBA2Q6ZNG9 492 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 FILIP1Q7Z7B0 1213 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 FCHSD1Q86WN1 690 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 RAB11FIP4Q86YS3 637 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 NOSTRINQ8IVI9 506 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 TRIML1Q8N9V2 468 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 ZNF579Q8NAF0 562 aaKnown RBP9.28□□□□□ -0.92
SORT1-205ENST00000483508 KIF18AQ8NI77 898 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 CCDC34Q96HJ3 373 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 FEZ1Q99689 392 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 SLC26A6Q9BXS9 759 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 XPO4Q9C0E2 1151 aaKnown RBP9.28□□□□□ -0.92
SORT1-205ENST00000483508 ZCCHC17Q9NP64 241 aaKnown RBP9.28□□□□□ -0.92
SORT1-205ENST00000483508 IFNKQ9P0W0 207 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 ZSWIM5Q9P217 1185 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 ANAPC4Q9UJX5 808 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 SNCAIPQ9Y6H5 919 aa9.28□□□□□ -0.92
SORT1-205ENST00000483508 PDE4DIPQ5VU43 2346 aa9.27□□□□□ -0.92
SORT1-205ENST00000483508 BTBD19C9JJ37 291 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 IRF6O14896 467 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 BMP15O95972 392 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 GNRH1P01148 92 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 XBP1P17861 261 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
SORT1-205ENST00000483508 LACTBP83111 547 aaPredicted RBP9.27□□□□□ -0.93
SORT1-205ENST00000483508 FANCCQ00597 558 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 PPATQ06203 517 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 APOBEC3HQ6NTF7 200 aaKnown RBP9.27□□□□□ -0.93
SORT1-205ENST00000483508 TMC6Q7Z403 805 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 ZSCAN29Q8IWY8 852 aaPredicted RBP9.27□□□□□ -0.93
SORT1-205ENST00000483508 FAM151AQ8WW52 585 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 PHKBQ93100 1093 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 ZNF333Q96JL9 665 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 AIFM3Q96NN9 605 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 RNF26Q9BY78 433 aaPredicted RBP9.27□□□□□ -0.93
SORT1-205ENST00000483508 ARMT1Q9H993 441 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 BIN2Q9UBW5 565 aaPredicted RBP9.27□□□□□ -0.93
SORT1-205ENST00000483508 KCNH3Q9ULD8 1083 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 SLC4A4Q9Y6R1 1079 aa9.27□□□□□ -0.93
SORT1-205ENST00000483508 BAZ2AQ9UIF9 1905 aaKnown RBP9.27□□□□□ -0.93
SORT1-205ENST00000483508 PDHXO00330 501 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 IGSF3O75054 1194 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 CALM1P0DP23 149 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 CALM2P0DP24 149 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 CALM3P0DP25 149 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 PTPREP23469 700 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 INPP5BP32019 993 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 NT5C2P49902 561 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 PRMT2P55345 433 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 CTDSPL2Q05D32 466 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 NCBP1Q09161 790 aaKnown RBP9.26□□□□□ -0.93
SORT1-205ENST00000483508 HABP4Q5JVS0 413 aaKnown RBP9.26□□□□□ -0.93
SORT1-205ENST00000483508 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 ZNF654Q8IZM8 581 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 LCORLQ8N3X6 602 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 MLKLQ8NB16 471 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 CNNM3Q8NE01 707 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 RAET1EQ8TD07 263 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 SH3TC2Q8TF17 1288 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 ESR2Q92731 530 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 SENP2Q9HC62 589 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 PICK1Q9NRD5 415 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 GJB4Q9NTQ9 266 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 USP40Q9NVE5 1235 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 RBM28Q9NW13 759 aaKnown RBP9.26□□□□□ -0.93
SORT1-205ENST00000483508 CPA4Q9UI42 421 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 DENND2AQ9ULE3 1009 aa9.26□□□□□ -0.93
SORT1-205ENST00000483508 PDS5AQ29RF7 1337 aaKnown RBP9.26□□□□□ -0.93
SORT1-205ENST00000483508 A0A087WWV3 80 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 MAGEB6P1A0A0J9YX57 407 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 BIN1O00499 593 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 SEMA3EO15041 775 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 ZBTB22O15209 634 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 RXRAP19793 462 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 PSMC4P43686 418 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 UBASH3AP57075 661 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 AKAP17AQ02040 695 aaKnown RBP9.25□□□□□ -0.93
SORT1-205ENST00000483508 PPARAQ07869 468 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 ARID5BQ14865 1188 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 DIXDC1Q155Q3 683 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 PPP4R3BQ5MIZ7 849 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 NT5DC1Q5TFE4 455 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 CDC42EP5Q6NZY7 148 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 ARMCX5Q6P1M9 558 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 ANKRD23Q86SG2 305 aa9.25□□□□□ -0.93
SORT1-205ENST00000483508 METTL16Q86W50 562 aaKnown RBP9.25□□□□□ -0.93
SORT1-205ENST00000483508 DZIP1Q86YF9 867 aaKnown RBP9.25□□□□□ -0.93
SORT1-205ENST00000483508 DIS3L2Q8IYB7 885 aaKnown RBP9.25□□□□□ -0.93
SORT1-205ENST00000483508 CRACR2BQ8N4Y2 399 aaPredicted RBP9.25□□□□□ -0.93
SORT1-205ENST00000483508 TSC1Q92574 1164 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms