RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 CLCN6P51797 869 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-218ENST00000482171 RAPGEF1Q13905 1077 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 CEP57Q86XR8 500 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 TDRD3Q9H7E2 651 aaKnown RBP12.59□□□□□ -0.39
SMPD4-218ENST00000482171 RPAP1Q9BWH6 1393 aaPredicted RBP12.59□□□□□ -0.39
SMPD4-218ENST00000482171 KIF28PB7ZC32 967 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 TTLL1O95922 423 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 ANTXR2P58335 489 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 TBCKQ8TEA7 893 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
SMPD4-218ENST00000482171 PPP6R2O75170 966 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 CKAP4Q07065 602 aaKnown RBP12.59□□□□□ -0.39
SMPD4-218ENST00000482171 HAUS3Q68CZ6 603 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 FBXO11Q86XK2 927 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 CNGA4Q8IV77 575 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 TPH2Q8IWU9 490 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
SMPD4-218ENST00000482171 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 PPP1R13BQ96KQ4 1090 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 ALS2CR12Q96Q35 445 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 GOLPH3LQ9H4A5 285 aa12.59□□□□□ -0.39
SMPD4-218ENST00000482171 SORBS3O60504 671 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 KRT13P13646 458 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 ADRA2BP18089 450 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 IFFO1Q0D2I5 559 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 UBE2SQ16763 222 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 TMTC3Q6ZXV5 915 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 AFAP1L1Q8TED9 768 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 MXD3Q9BW11 206 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 SLC39A2Q9NP94 309 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 PCDHA4Q9UN74 947 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 ALX1Q15699 326 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 FAM76AQ8TAV0 307 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 PRM3Q9NNZ6 103 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 ABCC12Q96J65 1359 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
SMPD4-218ENST00000482171 PPARDQ03181 441 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 KIF5AQ12840 1032 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 KMT5BQ4FZB7 885 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 CLEC10AQ8IUN9 316 aa12.58□□□□□ -0.4
SMPD4-218ENST00000482171 EFCAB8A8MWE9 144 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 ZBTB7AO95365 584 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 HARSP12081 509 aaKnown RBP12.57□□□□□ -0.4
SMPD4-218ENST00000482171 AOC3Q16853 763 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 C3orf67Q6ZVT6 689 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 DNM3Q9UQ16 869 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 CEP95Q96GE4 821 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.57□□□□□ -0.4
SMPD4-218ENST00000482171 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-218ENST00000482171 NF2P35240 595 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 PTF1AQ7RTS3 328 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 EHBP1Q8NDI1 1231 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-218ENST00000482171 GOPCQ9HD26 462 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 FAM207AQ9NSI2 230 aaPredicted RBP12.57□□□□□ -0.4
SMPD4-218ENST00000482171 DDX25Q9UHL0 483 aaKnown RBP12.57□□□□□ -0.4
SMPD4-218ENST00000482171 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 UBE2Q2LH0YL09 131 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 ATP1A3P13637 1013 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 TXNRD3Q86VQ6 643 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 GLT8D2Q9H1C3 349 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 KCNF1Q9H3M0 494 aa12.57□□□□□ -0.4
SMPD4-218ENST00000482171 ARHGEF35A5YM69 484 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 CCDC169A6NNP5 214 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 H7C1D1 291 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-218ENST00000482171 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 RC3H1Q5TC82 1133 aaKnown RBP12.56□□□□□ -0.4
SMPD4-218ENST00000482171 SPECC1LQ69YQ0 1117 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 ARHGAP27Q6ZUM4 889 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 STAG2Q8N3U4 1231 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 RDH13Q8NBN7 331 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 CHURC1Q8WUH1 139 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 DYDC1Q8WWB3 177 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 PPM1EQ8WY54 764 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.56□□□□□ -0.41e-12■■■■■ 111.8
SMPD4-218ENST00000482171 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 USP27XA6NNY8 438 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 PNMA6AP0CW24 399 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-218ENST00000482171 CRKP46108 304 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 NAPGQ99747 312 aaPredicted RBP12.56□□□□□ -0.4
SMPD4-218ENST00000482171 SLF1Q9BQI6 1058 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 NLRC4Q9NPP4 1024 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 PPP2R2CQ9Y2T4 447 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 KRT86O43790 486 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 GYS2P54840 703 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 TBC1D16Q8TBP0 767 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 IGDCC4Q8TDY8 1250 aa12.56□□□□□ -0.4
SMPD4-218ENST00000482171 NAP1L4Q99733 375 aaKnown RBP12.56□□□□□ -0.4
SMPD4-218ENST00000482171 MROH7-TTC4A0A0A0MT08 1334 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms