RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 ZSWIM8A7E2V4 1837 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 ZNF536O15090 1300 aa12.62□□□□□ -0.39
ATG4B-219ENST00000479941 COL11A1P12107 1806 aaPredicted RBP12.61□□□□□ -0.39
ATG4B-219ENST00000479941 ICAM1P05362 532 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 FCER1AP12319 257 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 RGS2P41220 211 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 GRB14Q14449 540 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 MORN1Q5T089 497 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 CCDC174Q6PII3 467 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 STAG2Q8N3U4 1231 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 CHST13Q8NET6 341 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 PXYLP1Q8TE99 480 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 USP6NLQ92738 828 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 LZTS2Q9BRK4 669 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 AGXT2Q9BYV1 514 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 DOCK3Q8IZD9 2030 aa12.61□□□□□ -0.39
ATG4B-219ENST00000479941 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
ATG4B-219ENST00000479941 XRCC5P13010 732 aaKnown RBP12.6□□□□□ -0.39
ATG4B-219ENST00000479941 SMARCA1P28370 1054 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 GNAQP50148 359 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 RCAN1P53805 252 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 SNAP25P60880 206 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 KCTD2Q14681 263 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 APOA5Q6Q788 366 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.6□□□□□ -0.39
ATG4B-219ENST00000479941 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 FANCBQ8NB91 859 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 BRF1Q92994 677 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 AGBL1Q96MI9 1066 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 MYL10Q9BUA6 226 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 CPVLQ9H3G5 476 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 JMJD4Q9H9V9 463 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 SLC5A4Q9NY91 659 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 CCPG1Q9ULG6 757 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 HPS5Q9UPZ3 1129 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 RIPK3Q9Y572 518 aa12.6□□□□□ -0.39
ATG4B-219ENST00000479941 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 ZBTB43O43298 467 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 ADCY3O60266 1144 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 HOXC6P09630 235 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 ALAS1P13196 640 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 CYP2B6P20813 491 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 ADORA2AP29274 412 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 GRK4P32298 578 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 PPP2R5BQ15173 497 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 CDC37Q16543 378 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-219ENST00000479941 SLC9C1Q4G0N8 1177 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 DPP9Q86TI2 863 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 MICU3Q86XE3 530 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 TRMT44Q8IYL2 757 aaKnown RBP12.59□□□□□ -0.39
ATG4B-219ENST00000479941 TRERF1Q96PN7 1200 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 MMP19Q99542 508 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
ATG4B-219ENST00000479941 RIOX1Q9H6W3 641 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 ACAD9Q9H845 621 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 UPF2Q9HAU5 1272 aaKnown RBP12.59□□□□□ -0.39
ATG4B-219ENST00000479941 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 RBM28Q9NW13 759 aaKnown RBP12.59□□□□□ -0.39
ATG4B-219ENST00000479941 BRPF3Q9ULD4 1205 aa12.59□□□□□ -0.39
ATG4B-219ENST00000479941 ZBTB5O15062 677 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 RXRAP19793 462 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 EVCP57679 992 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 TRAF1Q13077 416 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 QRICH1Q2TAL8 776 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 ANKRD35Q8N283 1001 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 MTMR8Q96EF0 704 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 ABHD8Q96I13 439 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 APBA2Q99767 749 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 SPZ1Q9BXG8 430 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 HOMER2Q9NSB8 354 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 PDRG1Q9NUG6 133 aa12.58□□□□□ -0.4
ATG4B-219ENST00000479941 CYTH3O43739 400 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 APOBRQ0VD83 1088 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 TOB2Q14106 344 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-219ENST00000479941 RTN1Q16799 776 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 TMTC3Q6ZXV5 915 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 FBXO11Q86XK2 927 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 RAB11FIP4Q86YS3 637 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 CCDC144CPQ8IYA2 1237 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 DDX11Q96FC9 970 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 AMNQ9BXJ7 453 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 C22orf23Q9BZE7 217 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 MAF1Q9H063 256 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 ALDH8A1Q9H2A2 487 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-219ENST00000479941 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
ATG4B-219ENST00000479941 ZNF236Q9UL36 1845 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 ABCB11O95342 1321 aa12.57□□□□□ -0.4
ATG4B-219ENST00000479941 PLXNB2O15031 1838 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 BRCA2P51587 3418 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 PNMA6FA0A0J9YX94 578 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 CCDC196A0A1B0GTZ2 297 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 GOLGA8AA7E2F4 631 aa12.56□□□□□ -0.4
ATG4B-219ENST00000479941 GOLGA8BA8MQT2 603 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms