RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 RANBP6O60518 1105 aaKnown RBP13.84□□□□□ -0.19
VARS2-208ENST00000477052 SLC3A2P08195 630 aaKnown RBP13.84□□□□□ -0.19
VARS2-208ENST00000477052 SLC1A4P43007 532 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 ACLYP53396 1101 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 PDE1AP54750 535 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 CCDC144BQ3MJ40 725 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 MAMDC4Q6UXC1 1216 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 CCDC144CPQ8IYA2 1237 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 GUCD1Q96NT3 240 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 PURBQ96QR8 312 aaKnown RBP13.84□□□□□ -0.19
VARS2-208ENST00000477052 ZNF536O15090 1300 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 SYNGAP1Q96PV0 1343 aa13.84□□□□□ -0.19
VARS2-208ENST00000477052 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
VARS2-208ENST00000477052 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 DLL1O00548 723 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 CLTBP09497 229 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 C6orf222P0C671 652 aaPredicted RBP13.83□□□□□ -0.2
VARS2-208ENST00000477052 ALAS1P13196 640 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 STAT2P52630 851 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 MUM1L1Q5H9M0 696 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 RRP12Q5JTH9 1297 aaKnown RBP13.83□□□□□ -0.2
VARS2-208ENST00000477052 TTBK2Q6IQ55 1244 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 ARMCX2Q7L311 632 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 KLHDC9Q8NEP7 349 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 STAG1Q8WVM7 1258 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 LNPKQ9C0E8 428 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 TOMM22Q9NS69 142 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 RNF146Q9NTX7 359 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
VARS2-208ENST00000477052 STXBP5LQ9Y2K9 1186 aa13.83□□□□□ -0.2
VARS2-208ENST00000477052 SOWAHBA6NEL2 793 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 SLC16A2P36021 539 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 HAND2P61296 217 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 BEX3Q00994 111 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
VARS2-208ENST00000477052 CCDC96Q2M329 555 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 TMEM63BQ5T3F8 832 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 C1orf53Q5VUE5 145 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 CCSAPQ6IQ19 270 aaPredicted RBP13.82□□□□□ -0.2
VARS2-208ENST00000477052 B4GALNT3Q6L9W6 998 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 ZNF589Q86UQ0 364 aaPredicted RBP13.82□□□□□ -0.2
VARS2-208ENST00000477052 CHST13Q8NET6 341 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 EVI5LQ96CN4 794 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 GMCL1Q96IK5 515 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 TRERF1Q96PN7 1200 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 ACAD9Q9H845 621 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 A1CFQ9NQ94 594 aaKnown RBP13.82□□□□□ -0.2
VARS2-208ENST00000477052 STARD7Q9NQZ5 370 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 TMEM39AQ9NV64 488 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 PRR12Q9ULL5 1215 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 ASTN1O14525 1302 aa13.82□□□□□ -0.2
VARS2-208ENST00000477052 FRMPD2Q68DX3 1309 aaPredicted RBP13.82□□□□□ -0.2
VARS2-208ENST00000477052 DUSP11O75319 330 aaKnown RBP13.81□□□□□ -0.2
VARS2-208ENST00000477052 ASGR1P07306 291 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 RAG1P15918 1043 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 RCSD1Q6JBY9 416 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 NOL8Q76FK4 1167 aaKnown RBP13.81□□□□□ -0.2
VARS2-208ENST00000477052 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
VARS2-208ENST00000477052 FAM160B2Q86V87 743 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 MSL3Q8N5Y2 521 aaKnown RBP13.81□□□□□ -0.2
VARS2-208ENST00000477052 FAM133AQ8N9E0 248 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 CHURC1Q8WUH1 139 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 VTI1AQ96AJ9 217 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 KATNBL1Q9H079 304 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 GPCPD1Q9NPB8 672 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 SYNPO2Q9UMS6 1093 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 A0A0C4DFX4 3053 aa13.81□□□□□ -0.2
VARS2-208ENST00000477052 KIAA0355O15063 1070 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 CTAGE5O15320 804 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 FGAP02671 866 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 OAZ1P54368 228 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 GNASQ5JWF2 1037 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 RILPL2Q969X0 211 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 TSEN34Q9BSV6 310 aaKnown RBP13.8□□□□□ -0.2
VARS2-208ENST00000477052 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 ANAPC4Q9UJX5 808 aa13.8□□□□□ -0.2
VARS2-208ENST00000477052 DCDC2CA8MYV0 355 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
VARS2-208ENST00000477052 HDAC1Q13547 482 aaPredicted RBP13.79□□□□□ -0.2
VARS2-208ENST00000477052 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 ZNF697Q5TEC3 545 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 NSMFQ6X4W1 530 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
VARS2-208ENST00000477052 FBXO16Q8IX29 292 aaPredicted RBP13.79□□□□□ -0.2
VARS2-208ENST00000477052 NUP133Q8WUM0 1156 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 RNPC3Q96LT9 517 aaKnown RBP13.79□□□□□ -0.2
VARS2-208ENST00000477052 CDX2Q99626 313 aaPredicted RBP13.79□□□□□ -0.2
VARS2-208ENST00000477052 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 TTYH1Q9H313 450 aaPredicted RBP13.79□□□□□ -0.2
VARS2-208ENST00000477052 CCPG1Q9ULG6 757 aa13.79□□□□□ -0.2
VARS2-208ENST00000477052 MOXD2PA6NHM9 499 aa13.78□□□□□ -0.2
VARS2-208ENST00000477052 ORC4O43929 436 aa13.78□□□□□ -0.2
VARS2-208ENST00000477052 IGHDP01880 384 aa13.78□□□□□ -0.2
VARS2-208ENST00000477052 GJA9P57773 515 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms