RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 LPXNO60711 386 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 SNAI1O95863 264 aaPredicted RBP12.48□□□□□ -0.41
CDHR3-209ENST00000472116 SUPT20HL2P0C7V6 817 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 RFC2P35250 354 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 IRX5P78411 483 aaPredicted RBP12.48□□□□□ -0.41
CDHR3-209ENST00000472116 TFCP2Q12800 502 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 DDX10Q13206 875 aaKnown RBP12.48□□□□□ -0.41
CDHR3-209ENST00000472116 MAMDC4Q6UXC1 1216 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 SLC43A3Q8NBI5 491 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 TET1Q8NFU7 2136 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 TRPV6Q9H1D0 765 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.48□□□□□ -0.41
CDHR3-209ENST00000472116 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
CDHR3-209ENST00000472116 FAM186AA6NE01 2351 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 USP34Q70CQ2 3546 aa12.48□□□□□ -0.41
CDHR3-209ENST00000472116 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
CDHR3-209ENST00000472116 IGSF3O75054 1194 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 MCAMP43121 646 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 BEX3Q00994 111 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 EP400NLQ6ZTU2 488 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
CDHR3-209ENST00000472116 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 CRBNQ96SW2 442 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 POP1Q99575 1024 aaKnown RBP12.47□□□□□ -0.41
CDHR3-209ENST00000472116 AP5M1Q9H0R1 490 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 MTUS1Q9ULD2 1270 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 ZFHX2Q9C0A1 2572 aaPredicted RBP12.47□□□□□ -0.41
CDHR3-209ENST00000472116 CACNA1HO95180 2353 aa12.47□□□□□ -0.41
CDHR3-209ENST00000472116 KMT2EQ8IZD2 1858 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 A0A1W2PRG0 241 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 POLR3DP05423 398 aaPredicted RBP12.46□□□□□ -0.41
CDHR3-209ENST00000472116 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 SHMT1P34896 483 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 DYNLL1P63167 89 aaKnown RBP12.46□□□□□ -0.41
CDHR3-209ENST00000472116 ZP2Q05996 745 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 ADGRA1Q86SQ6 560 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 RETREG2Q8NC44 543 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 ANKS1AQ92625 1134 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 PRKRIP1Q9H875 184 aaPredicted RBP12.46□□□□□ -0.41
CDHR3-209ENST00000472116 CTNNA3Q9UI47 895 aa12.46□□□□□ -0.41
CDHR3-209ENST00000472116 RIF1Q5UIP0 2472 aaKnown RBP12.45□□□□□ -0.42
CDHR3-209ENST00000472116 H3BQ06 376 aaPredicted RBP12.45□□□□□ -0.42
CDHR3-209ENST00000472116 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 ARHGEF15O94989 841 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 CYP7A1P22680 504 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 TNFAIP2Q03169 654 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 FSCN1Q16658 493 aaKnown RBP12.45□□□□□ -0.42
CDHR3-209ENST00000472116 TTC39AQ5SRH9 613 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 TMEM179Q6ZVK1 233 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 ADHFE1Q8IWW8 467 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 ATOH1Q92858 354 aaPredicted RBP12.45□□□□□ -0.42
CDHR3-209ENST00000472116 PBXIP1Q96AQ6 731 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 TGS1Q96RS0 853 aaKnown RBP12.45□□□□□ -0.42
CDHR3-209ENST00000472116 VCPKMTQ9H867 229 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 SNRKQ9NRH2 765 aa12.45□□□□□ -0.42
CDHR3-209ENST00000472116 CTDP1Q9Y5B0 961 aaPredicted RBP12.45□□□□□ -0.42
CDHR3-209ENST00000472116 VWA5AO00534 786 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 ADCY6O43306 1168 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 RAD21O60216 631 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 SLC4A3P48751 1232 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 PTPROQ16827 1216 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 ARMCX2Q7L311 632 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 BMP8AQ7Z5Y6 402 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 TLK2Q86UE8 772 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 MAGEB6Q8N7X4 407 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 TEX13BQ9BXU2 312 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 SUGCTQ9HAC7 445 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 FAM86C1Q9NVL1 165 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 MUTYHQ9UIF7 546 aa12.44□□□□□ -0.42
CDHR3-209ENST00000472116 CACNA1GO43497 2377 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 GABBR2O75899 941 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 NKX3-2P78367 333 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 ICA1Q05084 483 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 TIGD5Q53EQ6 642 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 HERC4Q5GLZ8 1057 aaPredicted RBP12.43□□□□□ -0.42
CDHR3-209ENST00000472116 IER5LQ5T953 404 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 SNRNP48Q6IEG0 339 aaKnown RBP12.43□□□□□ -0.42
CDHR3-209ENST00000472116 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 MIGA1Q8NAN2 632 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 ALDH8A1Q9H2A2 487 aaPredicted RBP12.43□□□□□ -0.42
CDHR3-209ENST00000472116 ZNF214Q9UL59 606 aaPredicted RBP12.43□□□□□ -0.42
CDHR3-209ENST00000472116 ADAMTS5Q9UNA0 930 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 TMX2Q9Y320 296 aa12.43□□□□□ -0.42
CDHR3-209ENST00000472116 PLXNA3P51805 1871 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 TNKSO95271 1327 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 C5orf42Q9H799 3197 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 CTAGE5O15320 804 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 CYP2C9P11712 490 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 IRS1P35568 1242 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 ID4P47928 161 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 PLCD1P51178 756 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 ERVK-21P61565 698 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 PSMC6P62333 389 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 TCF15Q12870 199 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 KIAA1755Q5JYT7 1200 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 SPRED2Q7Z698 418 aa12.42□□□□□ -0.42
CDHR3-209ENST00000472116 MRPL50Q8N5N7 158 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms