RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 H3BNC9 293 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 CHL1O00533 1208 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 PER1O15534 1290 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-206ENST00000471968 ADCY6O43306 1168 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 GDF11O95390 407 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 LDHBP07195 334 aaKnown RBP8.32□□□□□ -1.08
HDAC3-206ENST00000471968 FCER1AP12319 257 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 CASP7P55210 303 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 RRP1P56182 461 aaKnown RBP8.32□□□□□ -1.08
HDAC3-206ENST00000471968 GJA9P57773 515 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 ZNF200P98182 395 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-206ENST00000471968 LMNB2Q03252 620 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 PLS1Q14651 629 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 CCDC57Q2TAC2 916 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 PI4KAP1Q8N8J0 262 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 DTWD2Q8NBA8 298 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 KREMEN2Q8NCW0 462 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 FLCNQ8NFG4 579 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 MSLNLQ96KJ4 702 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 FEZ1Q99689 392 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 MROH8Q9H579 483 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 TRMT13Q9NUP7 481 aaKnown RBP8.32□□□□□ -1.08
HDAC3-206ENST00000471968 NCDNQ9UBB6 729 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 USP15Q9Y4E8 981 aaPredicted RBP8.32□□□□□ -1.08
HDAC3-206ENST00000471968 PTPRSQ13332 1948 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
HDAC3-206ENST00000471968 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 HECTD1Q9ULT8 2610 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 C1QTNF9BB2RNN3 333 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 PI15O43692 258 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 CSPG5O95196 566 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 C1QTNF9P0C862 333 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 VCAM1P19320 739 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 RIPK4P57078 832 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 PSMC6P62333 389 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 KSR2Q6VAB6 950 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 SMRP1Q8NCR6 262 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 PUS3Q9BZE2 481 aaKnown RBP8.31□□□□□ -1.08
HDAC3-206ENST00000471968 SIL1Q9H173 461 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 UPF3AQ9H1J1 476 aaKnown RBP8.31□□□□□ -1.08
HDAC3-206ENST00000471968 MBIPQ9NS73 344 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 RALGAPA2Q2PPJ7 1873 aa8.31□□□□□ -1.08
HDAC3-206ENST00000471968 TEP1Q99973 2627 aaKnown RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 CTAGE5O15320 804 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 CABYRO75952 493 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 BRD1O95696 1058 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 IQCF3P0C7M6 154 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 PMLP29590 882 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 FOXO4P98177 505 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 MTMR3Q13615 1198 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 ZNF792Q3KQV3 632 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 SOWAHCQ53LP3 525 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 CWF19L1Q69YN2 538 aaKnown RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 ZC3H14Q6PJT7 736 aaKnown RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 UBALD2Q8IYN6 164 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 GPR161Q8N6U8 529 aaKnown RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 RIN2Q8WYP3 895 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 C12orf42Q96LP6 360 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 MMP19Q99542 508 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 ALDH8A1Q9H2A2 487 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 SMOC2Q9H3U7 446 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 RPAP3Q9H6T3 665 aaPredicted RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 HERC5Q9UII4 1024 aaKnown RBP8.3□□□□□ -1.08
HDAC3-206ENST00000471968 ZBTB21Q9ULJ3 1066 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 IGSF10Q6WRI0 2623 aa8.3□□□□□ -1.08
HDAC3-206ENST00000471968 COL11A1P12107 1806 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-206ENST00000471968 ZNF462Q96JM2 2506 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 SNAI1O95863 264 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-206ENST00000471968 SUPT20HL2P0C7V6 817 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 AOC1P19801 751 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 SP100P23497 879 aaPredicted RBP8.29□□□□□ -1.08
HDAC3-206ENST00000471968 BTDP43251 543 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 SHC2P98077 582 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 ADAM15Q13444 863 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 VARS2Q5ST30 1063 aaKnown RBP8.29□□□□□ -1.08
HDAC3-206ENST00000471968 LMBR1LQ6UX01 489 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 UNQ6494/PRO21346Q6UXR6 183 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 SUMF1Q8NBK3 374 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 RETREG2Q8NC44 543 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 SAMD11Q96NU1 681 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 CLEC1BQ9P126 229 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 ANKFY1Q9P2R3 1169 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 USP18Q9UMW8 372 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 INSL6Q9Y581 213 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 COL4A3Q01955 1670 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 TENM4Q6N022 2769 aa8.29□□□□□ -1.08
HDAC3-206ENST00000471968 SRRM3A6NNA2 597 aaPredicted RBP8.28□□□□□ -1.08
HDAC3-206ENST00000471968 COASYQ13057 564 aa8.28□□□□□ -1.08
HDAC3-206ENST00000471968 CCDC144BQ3MJ40 725 aa8.28□□□□□ -1.08
HDAC3-206ENST00000471968 TET1Q8NFU7 2136 aa8.28□□□□□ -1.08
HDAC3-206ENST00000471968 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.28□□□□□ -1.08
HDAC3-206ENST00000471968 SEZ6LQ9BYH1 1024 aa8.28□□□□□ -1.08
HDAC3-206ENST00000471968 SORCS3Q9UPU3 1222 aa8.28□□□□□ -1.08
HDAC3-206ENST00000471968 DIS3Q9Y2L1 958 aaKnown RBP8.28□□□□□ -1.08
HDAC3-206ENST00000471968 MROH5Q6ZUA9 1318 aa8.28□□□□□ -1.08
HDAC3-206ENST00000471968 ELL2O00472 640 aaPredicted RBP8.27□□□□□ -1.09
HDAC3-206ENST00000471968 HSPA5P11021 654 aaKnown RBP8.27□□□□□ -1.09
HDAC3-206ENST00000471968 RBM25P49756 843 aaKnown RBP8.27□□□□□ -1.09
HDAC3-206ENST00000471968 USP14P54578 494 aa8.27□□□□□ -1.09
HDAC3-206ENST00000471968 ACVR2BQ13705 512 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms