RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 SLC4A7Q9Y6M7 1214 aa8.2□□□□□ -1.1
SF3A3-205ENST00000470585 PDE6AP16499 860 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 TAL1P17542 331 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-205ENST00000470585 RFC2P35250 354 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 GNASQ5JWF2 1037 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 KIAA1755Q5JYT7 1200 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 SLC9C2Q5TAH2 1124 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 C12orf60Q5U649 245 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 RPAP2Q8IXW5 612 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-205ENST00000470585 EAF2Q96CJ1 260 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-205ENST00000470585 SLF1Q9BQI6 1058 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 LRFN3Q9BTN0 628 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
SF3A3-205ENST00000470585 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-205ENST00000470585 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-205ENST00000470585 GBF1Q92538 1859 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 TCRBV5S4A2TA0A5A2 114 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 ASB14A6NK59 587 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 APBB1O00213 710 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 ACTN1P12814 892 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 ATP2A2P16615 1042 aaKnown RBP8.18□□□□□ -1.1
SF3A3-205ENST00000470585 CDK8P49336 464 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 CCDC144BQ3MJ40 725 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 SPICE1Q8N0Z3 855 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 PPM1EQ8WY54 764 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 SLC9A7Q96T83 725 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
SF3A3-205ENST00000470585 NYAP2Q9P242 653 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 ZHX1Q9UKY1 873 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-205ENST00000470585 YBX2Q9Y2T7 364 aaKnown RBP8.18□□□□□ -1.1
SF3A3-205ENST00000470585 ZBED9Q6R2W3 1325 aa8.18□□□□□ -1.1
SF3A3-205ENST00000470585 MCM3APO60318 1980 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 TCF20Q9UGU0 1960 aaKnown RBP8.17□□□□□ -1.1
SF3A3-205ENST00000470585 XIRP2A4UGR9 3374 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 GRXCR1A8MXD5 290 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 PI4K2BG5E9Z4 385 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 CTAGE5O15320 804 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 TLL1O43897 1013 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 ZBED4O75132 1171 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 EEF2P13639 858 aaKnown RBP8.17□□□□□ -1.1
SF3A3-205ENST00000470585 AKR1B1P15121 316 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 ITGA7Q13683 1181 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 CCDC85BQ15834 202 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-205ENST00000470585 TKFCQ3LXA3 575 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 PPP4R3BQ5MIZ7 849 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 IQSEC1Q6DN90 963 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 SNRNP48Q6IEG0 339 aaKnown RBP8.17□□□□□ -1.1
SF3A3-205ENST00000470585 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 ARMCX2Q7L311 632 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 HLA-CQ95604 372 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 CDCA7LQ96GN5 454 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.17□□□□□ -1.12e-7■□□□□ 10.1
SF3A3-205ENST00000470585 KATNBL1Q9H079 304 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 SLC38A10Q9HBR0 1119 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 ZNF287Q9HBT7 754 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
SF3A3-205ENST00000470585 ARPP21Q9UBL0 812 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-205ENST00000470585 RAPGEFL1Q9UHV5 662 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 FEM1BQ9UK73 627 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 GNEQ9Y223 722 aaKnown RBP8.17□□□□□ -1.1
SF3A3-205ENST00000470585 MTCH2Q9Y6C9 303 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 TNKSO95271 1327 aa8.17□□□□□ -1.1
SF3A3-205ENST00000470585 MYADML2A6NDP7 307 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 PRR33A8MZF0 331 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 KIF28PB7ZC32 967 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 USP17L12C9JPN9 530 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 USP17L21D6R901 530 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 PLA2G6O60733 806 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 BAIAP3O94812 1187 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 PARNO95453 639 aaKnown RBP8.16□□□□□ -1.1
SF3A3-205ENST00000470585 ACRP10323 421 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 CYP2C18P33260 490 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 TNFAIP2Q03169 654 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 UBE3CQ15386 1083 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 FSCN1Q16658 493 aaKnown RBP8.16□□□□□ -1.1
SF3A3-205ENST00000470585 SBK1Q52WX2 424 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 FAM83BQ5T0W9 1011 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 ZKSCAN2Q63HK3 967 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 ANKRD35Q8N283 1001 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 MKL1Q969V6 931 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 LENG1Q96BZ8 264 aaPredicted RBP8.16□□□□□ -1.1
SF3A3-205ENST00000470585 KIF12Q96FN5 646 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 AGBL1Q96MI9 1066 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 PPP1R12CQ9BZL4 782 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 AP5M1Q9H0R1 490 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 CCDC8Q9H0W5 538 aaPredicted RBP8.16□□□□□ -1.1
SF3A3-205ENST00000470585 ANTXR1Q9H6X2 564 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 ZNF532Q9HCE3 1301 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 FBXO28Q9NVF7 368 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 TRPC6Q9Y210 931 aa8.16□□□□□ -1.1
SF3A3-205ENST00000470585 CTDP1Q9Y5B0 961 aaPredicted RBP8.16□□□□□ -1.1
SF3A3-205ENST00000470585 LRRC37A2A6NM11 1700 aa8.15□□□□□ -1.1
SF3A3-205ENST00000470585 REV3LO60673 3130 aa8.15□□□□□ -1.1
SF3A3-205ENST00000470585 KPNA6O60684 536 aa8.15□□□□□ -1.1
SF3A3-205ENST00000470585 ADD2P35612 726 aa8.15□□□□□ -1.1
SF3A3-205ENST00000470585 PTPN11Q06124 597 aaPredicted RBP8.15□□□□□ -1.1
SF3A3-205ENST00000470585 LRRFIP1Q32MZ4 808 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms