RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 CCT8L2Q96SF2 557 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 TMX4Q9H1E5 349 aaPredicted RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 NHEJ1Q9H9Q4 299 aaPredicted RBP8.87□□□□□ -0.99
TPM3-215ENST00000469717 SALL4Q9UJQ4 1053 aa8.87□□□□□ -0.99
TPM3-215ENST00000469717 DNM1LO00429 736 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 HLFQ16534 295 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 QPCTQ16769 361 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 AMOTQ4VCS5 1084 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 CEP85LQ5SZL2 805 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 EPB41L4AQ9HCS5 686 aaPredicted RBP8.86□□□□□ -0.99
TPM3-215ENST00000469717 USP21Q9UK80 565 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 LMO7Q8WWI1 1683 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 NBPF26B4DH59 902 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 GOLGA8KD6RF30 607 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 CHUKO15111 745 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 MCM3P25205 808 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 SATB1Q01826 763 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 CKAP4Q07065 602 aaKnown RBP8.86□□□□□ -0.99
TPM3-215ENST00000469717 CCDC96Q2M329 555 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 NBPF10Q6P3W6 841 aaKnown RBP8.86□□□□□ -0.99
TPM3-215ENST00000469717 IQCA1Q86XH1 822 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 NBPF15Q8N660 670 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 MB21D1Q8N884 522 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 MYCBPAPQ8TBZ2 947 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 ZNF532Q9HCE3 1301 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 KRT86O43790 486 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 HSF2BPO75031 334 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 NF2P35240 595 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 RTN1Q16799 776 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 KANK3Q6NY19 840 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 AMOTL1Q8IY63 956 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 CCDC24Q8N4L8 307 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 GSDMAQ96QA5 445 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 SLC52A2Q9HAB3 445 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 TBC1D2BQ9UPU7 963 aa8.86□□□□□ -0.99
TPM3-215ENST00000469717 DDX60Q8IY21 1712 aaKnown RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 LRRC10BA6NIK2 292 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 TRIM75PA6NK02 468 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 H7C1W4 665 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 RASSF9O75901 435 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 IFNAR1P17181 557 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 TRIM21P19474 475 aaKnown RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 TMOD1P28289 359 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 SKOR1P84550 965 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 PTPROQ16827 1216 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 PREPLQ4J6C6 727 aaPredicted RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 ELOA2Q8IYF1 753 aaPredicted RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 DNAJC7Q99615 494 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 VCPKMTQ9H867 229 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 SNX12Q9UMY4 172 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 KDM6AO15550 1401 aaPredicted RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 BUB1O43683 1085 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 KIF1CO43896 1103 aaKnown RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 VEGFAP15692 232 aaPredicted RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 DDR1Q08345 913 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 PTGDRQ13258 359 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 PTGISQ16647 500 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 ACCSLQ4AC99 568 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 KIF6Q6ZMV9 814 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 B4GALNT4Q76KP1 1039 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 TBC1D31Q96DN5 1066 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 PCMTD1Q96MG8 357 aaPredicted RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 OSBPL7Q9BZF2 842 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 TTC36A6NLP5 189 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 PP2D1A8MPX8 630 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 EPHB6O15197 1021 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 PPP1R37O75864 691 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 NR1D1P20393 614 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 SEMA3FQ13275 785 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 IL17AQ16552 155 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 TYW1BQ6NUM6 668 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 CRACR2BQ8N4Y2 399 aaPredicted RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 ZNF579Q8NAF0 562 aaKnown RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 PIK3R5Q8WYR1 880 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 CCDC114Q96M63 670 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 EPN3Q9H201 632 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 FOXP1Q9H334 677 aaPredicted RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 VEZTQ9HBM0 779 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 LRRC4CQ9HCJ2 640 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 AATFQ9NY61 560 aaKnown RBP eCLIP8.85□□□□□ -0.99
TPM3-215ENST00000469717 STIM2Q9P246 746 aa8.85□□□□□ -0.99
TPM3-215ENST00000469717 TPX2Q9ULW0 747 aaKnown RBP8.85□□□□□ -0.99
TPM3-215ENST00000469717 OPA1O60313 960 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 ADD2P35612 726 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 TRIM22Q8IYM9 498 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 EPB41L5Q9HCM4 733 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 PACSIN2Q9UNF0 486 aaPredicted RBP8.84□□□□□ -0.99
TPM3-215ENST00000469717 SPATA31A3Q5VYP0 1347 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 EIF4E1BA6NMX2 242 aaKnown RBP8.84□□□□□ -0.99
TPM3-215ENST00000469717 C21orf2O43822 256 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 GUCY2DQ02846 1103 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 CYB5D1Q6P9G0 228 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 SGMS1Q86VZ5 419 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 FAM89AQ96GI7 184 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 OSBPL9Q96SU4 736 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 ARMT1Q9H993 441 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 SLC4A4Q9Y6R1 1079 aa8.84□□□□□ -0.99
TPM3-215ENST00000469717 STK36Q9NRP7 1315 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms