RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 CHRNDQ07001 517 aa14.56□□□□□ -0.08
PDZRN3-205ENST00000466780 CKAP4Q07065 602 aaKnown RBP14.56□□□□□ -0.08
PDZRN3-205ENST00000466780 FAM205AQ6ZU69 1335 aa14.56□□□□□ -0.08
PDZRN3-205ENST00000466780 GOLGA6L1Q8N7Z2 621 aa14.56□□□□□ -0.08
PDZRN3-205ENST00000466780 DISC1Q9NRI5 854 aa14.56□□□□□ -0.08
PDZRN3-205ENST00000466780 CACNA1SQ13698 1873 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 PP2D1A8MPX8 630 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 PFKFB3Q16875 520 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 TTI2Q6NXR4 508 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 CTR9Q6PD62 1173 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 ZNF384Q8TF68 577 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 PURBQ96QR8 312 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 WTIPA6NIX2 430 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 EXOC5O00471 708 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 KRT86O43790 486 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 DNM2P50570 870 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 C2orf54Q08AI8 447 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 TSR1Q2NL82 804 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 EHBP1Q8NDI1 1231 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 TRIM47Q96LD4 638 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 DUSP9Q99956 384 aaKnown RBP14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 BRIP1Q9BX63 1249 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 NHEJ1Q9H9Q4 299 aaPredicted RBP14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 COL4A1P02462 1669 aa14.55□□□□□ -0.08
PDZRN3-205ENST00000466780 IL6STP40189 918 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 CYP27A1Q02318 531 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 KCNB1Q14721 858 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 LRRC15Q8TF66 581 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 EEF2KMTQ96G04 330 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 ZNF804BA4D1E1 1349 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 ANO9A1A5B4 782 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 SHOX2O60902 331 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 GYG1P46976 350 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 GIMAP8Q8ND71 665 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 CAGE1Q8TC20 777 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 SMARCC1Q92922 1105 aaPredicted RBP14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 HINFPQ9BQA5 517 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 TUBGCP2Q9BSJ2 902 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 BCL9O00512 1426 aa14.54□□□□□ -0.08
PDZRN3-205ENST00000466780 USP17L12C9JPN9 530 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 USP17L21D6R901 530 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 ZNF263O14978 683 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 RHOBTB3O94955 611 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 CYLC1P35663 651 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 IGHMBP2P38935 993 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 FAM47AQ5JRC9 791 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 AENQ8WTP8 325 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 PLIN2Q99541 437 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 CRACR2AQ9BSW2 395 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 EXOC1Q9NV70 894 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 MACROD2A1Z1Q3 448 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 PSMA7O14818 248 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 IDEP14735 1019 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 TRIM21P19474 475 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 EIF5P55010 431 aaKnown RBP14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 TTC31Q49AM3 519 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 BLIDQ8IZY5 108 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 TMEM60Q9H2L4 133 aa14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 MAGEC2Q9UBF1 373 aaPredicted RBP14.53□□□□□ -0.08
PDZRN3-205ENST00000466780 NKRFO15226 690 aaKnown RBP eCLIP14.52□□□□□ -0.08
PDZRN3-205ENST00000466780 EZH2Q15910 746 aaKnown RBP14.52□□□□□ -0.08
PDZRN3-205ENST00000466780 KAT14Q9H8E8 782 aa14.52□□□□□ -0.08
PDZRN3-205ENST00000466780 KBTBD4Q9NVX7 518 aa14.52□□□□□ -0.08
PDZRN3-205ENST00000466780 ABCA3Q99758 1704 aa14.52□□□□□ -0.08
PDZRN3-205ENST00000466780 PCP11498 1178 aaKnown RBP14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 ZBED6P86452 979 aa14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 CCDC152Q4G0S7 254 aa14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 CREG2Q8IUH2 290 aa14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 CCDC170Q8IYT3 715 aa14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 CSGALNACT2Q8N6G5 542 aa14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 SMCR8Q8TEV9 937 aaPredicted RBP14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 HDAC7Q8WUI4 952 aa14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 JADE2Q9NQC1 790 aa14.52□□□□□ -0.09
PDZRN3-205ENST00000466780 TBC1D8BQ0IIM8 1120 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 SKIDA1Q1XH10 827 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 DNAJC21Q5F1R6 531 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 TYW1BQ6NUM6 668 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 KRT26Q7Z3Y9 468 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 GOLGA6BA6NDN3 693 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 ORC4O43929 436 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 PLEKP08567 350 aaPredicted RBP14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 VAV2P52735 878 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 MIIPQ5JXC2 388 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 DTHD1Q6ZMT9 781 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 FAM76AQ8TAV0 307 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 PPM1EQ8WY54 764 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 NUP58Q9BVL2 599 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 ZNHIT6Q9NWK9 470 aaKnown RBP14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 LRWD1Q9UFC0 647 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 FAM184BQ9ULE4 1060 aa14.51□□□□□ -0.09
PDZRN3-205ENST00000466780 ANKRD40Q6AI12 368 aa14.5□□□□□ -0.09
PDZRN3-205ENST00000466780 RCSD1Q6JBY9 416 aa14.5□□□□□ -0.09
PDZRN3-205ENST00000466780 MMGT1Q8N4V1 131 aa14.5□□□□□ -0.09
PDZRN3-205ENST00000466780 RASSF8Q8NHQ8 419 aa14.5□□□□□ -0.09
PDZRN3-205ENST00000466780 NOC3LQ8WTT2 800 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms