RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 IGKV6D-41A0A0C4DH26 115 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 A0A0U1RQG5 324 aaPredicted RBP14.11□□□□□ -0.15
CNOT4-208ENST00000465721 F5H6K3 240 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 HMMRO75330 724 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 NKX3-2P78367 333 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
CNOT4-208ENST00000465721 KLRC3Q07444 240 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 CCDC144BQ3MJ40 725 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 SBK1Q52WX2 424 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 PSRC1Q6PGN9 363 aaPredicted RBP14.11□□□□□ -0.15
CNOT4-208ENST00000465721 PRPF38AQ8NAV1 312 aaKnown RBP14.11□□□□□ -0.15
CNOT4-208ENST00000465721 PCSK9Q8NBP7 692 aaKnown RBP14.11□□□□□ -0.15
CNOT4-208ENST00000465721 BCL11AQ9H165 835 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 ABHD16BQ9H3Z7 469 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 SLC38A10Q9HBR0 1119 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 PTPRSQ13332 1948 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 SCN10AQ9Y5Y9 1956 aa14.11□□□□□ -0.15
CNOT4-208ENST00000465721 ARVCFO00192 962 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 CD4P01730 458 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
CNOT4-208ENST00000465721 ADGRE1Q14246 886 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 AKNAD1Q5T1N1 836 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 CCDC174Q6PII3 467 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 ZNF365Q70YC5 407 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 ARMCX2Q7L311 632 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 CPXCR1Q8N123 301 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 TET1Q8NFU7 2136 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 STRBPQ96SI9 672 aaKnown RBP14.1□□□□□ -0.15
CNOT4-208ENST00000465721 GAS2L1Q99501 681 aaPredicted RBP14.1□□□□□ -0.15
CNOT4-208ENST00000465721 PPP1R12CQ9BZL4 782 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 PRDM12Q9H4Q4 367 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 RAVER2Q9HCJ3 691 aaKnown RBP14.1□□□□□ -0.15
CNOT4-208ENST00000465721 ZBTB40Q9NUA8 1239 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 THEGQ9P2T0 379 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 ASTN1O14525 1302 aa14.1□□□□□ -0.15
CNOT4-208ENST00000465721 GSG1L2A8MUP6 293 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 ACRP10323 421 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 GNASQ5JWF2 1037 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 ZSCAN25Q6NSZ9 544 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 CCDC129Q6ZRS4 1044 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 CCDC144CPQ8IYA2 1237 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 TMEM199Q8N511 208 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 SPC25Q9HBM1 224 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 EPB41L4AQ9HCS5 686 aaPredicted RBP14.09□□□□□ -0.15
CNOT4-208ENST00000465721 TRIP12Q14669 1992 aaPredicted RBP14.09□□□□□ -0.15
CNOT4-208ENST00000465721 PLIN4Q96Q06 1357 aa14.09□□□□□ -0.15
CNOT4-208ENST00000465721 ZBED4O75132 1171 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 COL9A1P20849 921 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 CYP2C18P33260 490 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 SLC4A3P48751 1232 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 OAZ1P54368 228 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 CNTN2Q02246 1040 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 GIMAP6Q6P9H5 292 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 STK11IPQ8N1F8 1099 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 ANKRD35Q8N283 1001 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 SLC43A3Q8NBI5 491 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 CHST13Q8NET6 341 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 ATXN2LQ8WWM7 1075 aaKnown RBP14.08□□□□□ -0.16
CNOT4-208ENST00000465721 HERVK_113Q902F9 699 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 KIFC2Q96AC6 838 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 IL23AQ9NPF7 189 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 CXXC1Q9P0U4 656 aaPredicted RBP14.08□□□□□ -0.16
CNOT4-208ENST00000465721 FBXO40Q9UH90 709 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 DDX19BQ9UMR2 479 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 SYNPO2Q9UMS6 1093 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 UMODL1Q5DID0 1318 aa14.08□□□□□ -0.16
CNOT4-208ENST00000465721 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
CNOT4-208ENST00000465721 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.07□□□□□ -0.16
CNOT4-208ENST00000465721 TLR3O15455 904 aaKnown RBP14.07□□□□□ -0.16
CNOT4-208ENST00000465721 BEX3Q00994 111 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 RAB30Q15771 203 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 LRRC47Q8N1G4 583 aaKnown RBP14.07□□□□□ -0.16
CNOT4-208ENST00000465721 FAM133AQ8N9E0 248 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 GMCL1P1Q8NEA9 526 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 PPM1EQ8WY54 764 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 OSBP2Q969R2 916 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 MKL1Q969V6 931 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 ASB2Q96Q27 587 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 MKNK2Q9HBH9 465 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 CLIP2Q9UDT6 1046 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 FEM1BQ9UK73 627 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
CNOT4-208ENST00000465721 MINDY4BA8MYZ0 360 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 VTI1AQ96AJ9 217 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 NKX2-4Q9H2Z4 354 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 HOMER2Q9NSB8 354 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 MTMR4Q9NYA4 1195 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 RAPGEFL1Q9UHV5 662 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 GNEQ9Y223 722 aaKnown RBP14.06□□□□□ -0.16
CNOT4-208ENST00000465721 YBX2Q9Y2T7 364 aaKnown RBP14.06□□□□□ -0.16
CNOT4-208ENST00000465721 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
CNOT4-208ENST00000465721 GRIN2DO15399 1336 aa14.06□□□□□ -0.16
CNOT4-208ENST00000465721 PRDM1O75626 825 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 MS4A1P11836 297 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 PTGS1P23219 599 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 CXCL17Q6UXB2 119 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 TLK2Q86UE8 772 aa14.05□□□□□ -0.16
CNOT4-208ENST00000465721 KBTBD3Q8NAB2 608 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms