RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
HCFC1-204ENST00000461098 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.28□□□□□ -0.12
HCFC1-204ENST00000461098 KCNQ1P51787 676 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 BEX3Q00994 111 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 ARMCX2Q7L311 632 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 OTOP2Q7RTS6 562 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 ERC1Q8IUD2 1116 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 RHPN1Q8TCX5 695 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 DNAJC2Q99543 621 aaKnown RBP14.28□□□□□ -0.12
HCFC1-204ENST00000461098 WNT8AQ9H1J5 351 aa14.28□□□□□ -0.12
HCFC1-204ENST00000461098 APBB1O00213 710 aa14.27□□□□□ -0.13
HCFC1-204ENST00000461098 TLR3O15455 904 aaKnown RBP14.27□□□□□ -0.13
HCFC1-204ENST00000461098 RAD21O60216 631 aa14.27□□□□□ -0.13
HCFC1-204ENST00000461098 PTGS1P23219 599 aa14.27□□□□□ -0.13
HCFC1-204ENST00000461098 CCDC144CPQ8IYA2 1237 aa14.27□□□□□ -0.13
HCFC1-204ENST00000461098 PRPF38AQ8NAV1 312 aaKnown RBP14.27□□□□□ -0.13
HCFC1-204ENST00000461098 C1QTNF1Q9BXJ1 281 aa14.27□□□□□ -0.13
HCFC1-204ENST00000461098 HIPK3Q9H422 1215 aa14.27□□□□□ -0.13
HCFC1-204ENST00000461098 GNEQ9Y223 722 aaKnown RBP14.27□□□□□ -0.13
HCFC1-204ENST00000461098 F5H6K3 240 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 NDUFB10O96000 172 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 POU3F3P20264 500 aaPredicted RBP14.26□□□□□ -0.13
HCFC1-204ENST00000461098 CCL23P55773 120 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 CNTN2Q02246 1040 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 KLRC3Q07444 240 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 CXCL17Q6UXB2 119 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 CPXCR1Q8N123 301 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 NOC4LQ9BVI4 516 aaKnown RBP14.26□□□□□ -0.13
HCFC1-204ENST00000461098 EPHX3Q9H6B9 360 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 SPC25Q9HBM1 224 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 RAVER2Q9HCJ3 691 aaKnown RBP14.26□□□□□ -0.13
HCFC1-204ENST00000461098 NYAP2Q9P242 653 aa14.26□□□□□ -0.13
HCFC1-204ENST00000461098 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
HCFC1-204ENST00000461098 PRRC2BQ5JSZ5 2229 aaKnown RBP14.26□□□□□ -0.13
HCFC1-204ENST00000461098 RFXAPO00287 272 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 ERC2O15083 957 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 RASA1P20936 1047 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 ITGA7Q13683 1181 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 PPP2R2DQ66LE6 453 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 AGBL1Q96MI9 1066 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 LRFN3Q9BTN0 628 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 TRPV6Q9H1D0 765 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 PAG1Q9NWQ8 432 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 PCDHA11Q9Y5I1 949 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 MTCH2Q9Y6C9 303 aa14.25□□□□□ -0.13
HCFC1-204ENST00000461098 LRRC37A2A6NM11 1700 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 IGKV6D-41A0A0C4DH26 115 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 EPOPA6NHQ4 379 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 B4GALT4O60513 344 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 SLC4A3P48751 1232 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 TNFAIP2Q03169 654 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 TMEM63BQ5T3F8 832 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 ANKRD35Q8N283 1001 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 FAM133AQ8N9E0 248 aa14.24□□□□□ -0.13
HCFC1-204ENST00000461098 KHSRPQ92945 711 aaKnown RBP eCLIP14.24□□□□□ -0.13
HCFC1-204ENST00000461098 PUS7LQ9H0K6 701 aaKnown RBP14.24□□□□□ -0.13
HCFC1-204ENST00000461098 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
HCFC1-204ENST00000461098 MTIF3Q9H2K0 278 aaKnown RBP14.24□□□□□ -0.13
HCFC1-204ENST00000461098 DDX49Q9Y6V7 483 aaKnown RBP14.24□□□□□ -0.13
HCFC1-204ENST00000461098 SOWAHBA6NEL2 793 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 TLL1O43897 1013 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 CABYRO75952 493 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 UBE3CQ15386 1083 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 KRT40Q6A162 431 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 CHST13Q8NET6 341 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 KIFC2Q96AC6 838 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 SCLYQ96I15 445 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 BOLA2Q9H3K6 86 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 C11orf16Q9NQ32 467 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 SLC4A7Q9Y6M7 1214 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 MYH7P12883 1935 aa14.23□□□□□ -0.13
HCFC1-204ENST00000461098 MYH4Q9Y623 1939 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 ZBED4O75132 1171 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 ARHGEF15O94989 841 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 ATP2A2P16615 1042 aaKnown RBP14.22□□□□□ -0.13
HCFC1-204ENST00000461098 SMPD1P17405 629 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 OAZ1P54368 228 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 PSMC6P62333 389 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 TTLL4Q14679 1199 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 FSCN1Q16658 493 aaKnown RBP14.22□□□□□ -0.13
HCFC1-204ENST00000461098 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 SBK1Q52WX2 424 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 HSP90AB4PQ58FF6 505 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 TLK2Q86UE8 772 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 FTSJ3Q8IY81 847 aaKnown RBP14.22□□□□□ -0.13
HCFC1-204ENST00000461098 CLASRPQ8N2M8 674 aaKnown RBP14.22□□□□□ -0.13
HCFC1-204ENST00000461098 MKL1Q969V6 931 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 PDGFCQ9NRA1 345 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 FBXO40Q9UH90 709 aa14.22□□□□□ -0.13
HCFC1-204ENST00000461098 ZNF536O15090 1300 aa14.21□□□□□ -0.13
HCFC1-204ENST00000461098 SCN5AQ14524 2016 aa14.21□□□□□ -0.13
HCFC1-204ENST00000461098 CA3P07451 260 aa14.21□□□□□ -0.13
HCFC1-204ENST00000461098 ATP5JP18859 108 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms