RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 LRRC26Q2I0M4 334 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 TTC14Q96N46 770 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 PRO3102Q9H379 93 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 ACAD9Q9H845 621 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 RNF146Q9NTX7 359 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 SYNGAP1Q96PV0 1343 aa22.28■■□□□ 1.16
COL5A1-203ENST00000460264 LRRC37A2A6NM11 1700 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 PDHBP11177 359 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 IMMTQ16891 758 aaKnown RBP22.27■■□□□ 1.16
COL5A1-203ENST00000460264 TTBK2Q6IQ55 1244 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 CCDC174Q6PII3 467 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 MAMDC4Q6UXC1 1216 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 BTNL9Q6UXG8 535 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 ZNF467Q7Z7K2 595 aaPredicted RBP22.27■■□□□ 1.16
COL5A1-203ENST00000460264 ARRDC4Q8NCT1 418 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 FGD4Q96M96 766 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 RBM27Q9P2N5 1060 aaKnown RBP22.27■■□□□ 1.16
COL5A1-203ENST00000460264 CTNNA3Q9UI47 895 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 CNPY2Q9Y2B0 182 aa22.27■■□□□ 1.16
COL5A1-203ENST00000460264 FRMPD2Q68DX3 1309 aaPredicted RBP22.27■■□□□ 1.16
COL5A1-203ENST00000460264 KDM4AO75164 1064 aa22.26■■□□□ 1.15
COL5A1-203ENST00000460264 ZNF865P0CJ78 1059 aaPredicted RBP22.26■■□□□ 1.15
COL5A1-203ENST00000460264 SLC16A2P36021 539 aa22.26■■□□□ 1.15
COL5A1-203ENST00000460264 TKFCQ3LXA3 575 aa22.26■■□□□ 1.15
COL5A1-203ENST00000460264 GJC2Q5T442 439 aaPredicted RBP22.26■■□□□ 1.15
COL5A1-203ENST00000460264 ZKSCAN3Q9BRR0 538 aa22.26■■□□□ 1.15
COL5A1-203ENST00000460264 SENP6Q9GZR1 1112 aaPredicted RBP22.26■■□□□ 1.15
COL5A1-203ENST00000460264 ZMYND8Q9ULU4 1186 aaPredicted RBP22.26■■□□□ 1.15
COL5A1-203ENST00000460264 B4E1Z4 1266 aa22.25■■□□□ 1.15
COL5A1-203ENST00000460264 KBTBD13C9JR72 458 aa22.25■■□□□ 1.15
COL5A1-203ENST00000460264 ALAS1P13196 640 aa22.25■■□□□ 1.15
COL5A1-203ENST00000460264 CHMLP26374 656 aa22.25■■□□□ 1.15
COL5A1-203ENST00000460264 SYDE2Q5VT97 1194 aa22.25■■□□□ 1.15
COL5A1-203ENST00000460264 TRERF1Q96PN7 1200 aa22.25■■□□□ 1.15
COL5A1-203ENST00000460264 RANBP17Q9H2T7 1088 aaKnown RBP22.25■■□□□ 1.15
COL5A1-203ENST00000460264 GPCPD1Q9NPB8 672 aa22.25■■□□□ 1.15
COL5A1-203ENST00000460264 A1CFQ9NQ94 594 aaKnown RBP22.25■■□□□ 1.15
COL5A1-203ENST00000460264 SNAI1O95863 264 aaPredicted RBP22.24■■□□□ 1.15
COL5A1-203ENST00000460264 ICAM1P05362 532 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 SNHG28P0DPA3 235 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 RARBP10826 455 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 AKR1A1P14550 325 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 FXR1P51114 621 aaKnown RBP eCLIP22.24■■□□□ 1.15
COL5A1-203ENST00000460264 ZNF543Q08ER8 600 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 LRRC41Q15345 812 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 IQCA1Q86XH1 822 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 DGKHQ86XP1 1220 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 FAM133AQ8N9E0 248 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 RUFY2Q8WXA3 655 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 XPNPEP3Q9NQH7 507 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 CCPG1Q9ULG6 757 aa22.24■■□□□ 1.15
COL5A1-203ENST00000460264 MYCNP04198 464 aaPredicted RBP22.23■■□□□ 1.15
COL5A1-203ENST00000460264 CNTN2Q02246 1040 aa22.23■■□□□ 1.15
COL5A1-203ENST00000460264 MUM1L1Q5H9M0 696 aa22.23■■□□□ 1.15
COL5A1-203ENST00000460264 LENG1Q96BZ8 264 aaPredicted RBP22.23■■□□□ 1.15
COL5A1-203ENST00000460264 POTEB2H3BUK9 544 aa22.22■■□□□ 1.15
COL5A1-203ENST00000460264 SYN1P17600 705 aa22.22■■□□□ 1.15
COL5A1-203ENST00000460264 ATN1P54259 1190 aaPredicted RBP22.22■■□□□ 1.15
COL5A1-203ENST00000460264 CCDC178Q5BJE1 867 aa22.22■■□□□ 1.15
COL5A1-203ENST00000460264 ARMCX2Q7L311 632 aa22.22■■□□□ 1.15
COL5A1-203ENST00000460264 KRT23Q9C075 422 aa22.22■■□□□ 1.15
COL5A1-203ENST00000460264 CNNM2Q9H8M5 875 aa22.22■■□□□ 1.15
COL5A1-203ENST00000460264 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.22■■□□□ 1.15
COL5A1-203ENST00000460264 ZHX1Q9UKY1 873 aaPredicted RBP22.22■■□□□ 1.15
COL5A1-203ENST00000460264 CCDC144CPQ8IYA2 1237 aa22.21■■□□□ 1.15
COL5A1-203ENST00000460264 ENAHQ8N8S7 591 aaPredicted RBP22.21■■□□□ 1.15
COL5A1-203ENST00000460264 PNMA1Q8ND90 353 aa22.21■■□□□ 1.15
COL5A1-203ENST00000460264 ANKS1AQ92625 1134 aa22.21■■□□□ 1.15
COL5A1-203ENST00000460264 ZSCAN10Q96SZ4 725 aaPredicted RBP22.21■■□□□ 1.15
COL5A1-203ENST00000460264 ZSWIM5Q9P217 1185 aa22.21■■□□□ 1.15
COL5A1-203ENST00000460264 LTBP2Q14767 1821 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 MYH6P13533 1939 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 PGK1P00558 417 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 PTH1RQ03431 593 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 ACVR2BQ13705 512 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 GPATCH4Q5T3I0 446 aaKnown RBP22.2■■□□□ 1.14
COL5A1-203ENST00000460264 GDF15Q99988 308 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 ABHD16BQ9H3Z7 469 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 KAT14Q9H8E8 782 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 CYP39A1Q9NYL5 469 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 FAM184BQ9ULE4 1060 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 ASTN1O14525 1302 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 TNKSO95271 1327 aa22.2■■□□□ 1.14
COL5A1-203ENST00000460264 SOWAHBA6NEL2 793 aa22.19■■□□□ 1.14
COL5A1-203ENST00000460264 SGSM2O43147 1006 aa22.19■■□□□ 1.14
COL5A1-203ENST00000460264 ADCYAP1R1P41586 468 aa22.19■■□□□ 1.14
COL5A1-203ENST00000460264 RNF180Q86T96 592 aa22.19■■□□□ 1.14
COL5A1-203ENST00000460264 KATNBL1Q9H079 304 aa22.19■■□□□ 1.14
COL5A1-203ENST00000460264 PHF24Q9UPV7 400 aa22.19■■□□□ 1.14
COL5A1-203ENST00000460264 SYNRGQ9UMZ2 1314 aa22.19■■□□□ 1.14
COL5A1-203ENST00000460264 A0A1W2PPC1 479 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 ADAMTS4O75173 837 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 GOLGA8HP0CJ92 632 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 MAGEA10P43363 369 aaPredicted RBP22.18■■□□□ 1.14
COL5A1-203ENST00000460264 RTP1P59025 263 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 SNX17Q15036 470 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 NSMFQ6X4W1 530 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 SLC39A5Q6ZMH5 540 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 UBAC1Q9BSL1 405 aa22.18■■□□□ 1.14
COL5A1-203ENST00000460264 PCDH10Q9P2E7 1040 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms