RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 RPS6KA5O75582 802 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 SASH3O75995 380 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 RHOBTB3O94955 611 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CAMTA2O94983 1202 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 BAG3O95817 575 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 FGRP09769 529 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 OR52Z1P0C646 297 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 TSPY3P0CV98 308 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 TSPY8P0CW00 308 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 IDEP14735 1019 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 PLCG2P16885 1265 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 TCP1P17987 556 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCNE1P24864 410 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 GNA11P29992 359 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 HIBADHP31937 336 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 PAFAH1B1P43034 410 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CRKLP46109 303 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 AARSP49588 968 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 FXR1P51114 621 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 VAV2P52735 878 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 USP14P54578 494 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 VSNL1P62760 191 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 ERVK-24P63145 666 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 IRX5P78411 483 aaPredicted RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CDK17Q00537 523 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 APBA1Q02410 837 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 PDE4DQ08499 809 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 RAD51AP2Q09MP3 1159 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 TBC1D8BQ0IIM8 1120 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 TROAPQ12815 778 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 GRM4Q14833 912 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 NONOQ15233 471 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 E2F4Q16254 413 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCDC96Q2M329 555 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 FIGNQ5HY92 759 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CLEC4GQ6UXB4 293 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 GBP6Q6ZN66 633 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 USP49Q70CQ1 688 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 APTXQ7Z2E3 356 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 TRAPPC11Q7Z392 1133 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 HEATR3Q7Z4Q2 680 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCDC84Q86UT8 332 aaPredicted RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CABP7Q86V35 215 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 DGKHQ86XP1 1220 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 SLF2Q8IX21 1173 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 SMYD4Q8IYR2 804 aaPredicted RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 SRBD1Q8N5C6 995 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 FAM76AQ8TAV0 307 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 TNFRSF25Q93038 417 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 P2RX5Q93086 422 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CNOT6LQ96LI5 555 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCDC42Q96M95 316 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 EIF3CQ99613 913 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 NAP1L4Q99733 375 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 RIOK1Q9BRS2 568 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 NOC4LQ9BVI4 516 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCSER1Q9C0I3 900 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 NUCKS1Q9H1E3 243 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 ANKZF1Q9H8Y5 726 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 JADE2Q9NQC1 790 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 SEC31BQ9NQW1 1179 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 MCM9Q9NXL9 1143 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 PODXL2Q9NZ53 605 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 STK17AQ9UEE5 414 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 L1RE1Q9UN81 338 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 FAN1Q9Y2M0 1017 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 GDAQ9Y2T3 454 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 THRAP3Q9Y2W1 955 aaKnown RBP3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 HYOU1Q9Y4L1 999 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 CCDC88AQ3V6T2 1871 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 MYH8P13535 1937 aa3.72□□□□□ -1.81
HMGN1P18-201ENST00000457642 LOC102724428A0A0B4J2F2 783 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 hCG_1642624A0A1W2PR95 340 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 TTC26A0AVF1 554 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 GOLGA6CA6NDK9 693 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 GOLGA6BA6NDN3 693 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 B4DLN1 442 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 H3BQF6 201 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 TULP2O00295 520 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 ZBTB22O15209 634 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 FANCGO15287 622 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 SLC26A4O43511 780 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 AKR1B10O60218 316 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 MARCH6O60337 910 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 RNF40O75150 1001 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 PPFIA4O75335 1185 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 CLSTN1O94985 981 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 ADAMTS2O95450 1211 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 GNA14O95837 355 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 LDHBP07195 334 aaKnown RBP3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 GOLGA6DP0CG33 693 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 SRGNP10124 158 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 CASP1P29466 404 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 USP8P40818 1118 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 ARHGAP25P42331 645 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 EPS15P42566 896 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 PRCPP42785 496 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 GYG1P46976 350 aa3.71□□□□□ -1.82
HMGN1P18-201ENST00000457642 EPHB4P54760 987 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms