RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 DDX20Q9UHI6 824 aaKnown RBP16.54■□□□□ 0.24
RTFDC1-204ENST00000449062 NRBP1Q9UHY1 535 aa16.54■□□□□ 0.24
RTFDC1-204ENST00000449062 MTMR7Q9Y216 660 aa16.54■□□□□ 0.24
RTFDC1-204ENST00000449062 SNAI1O95863 264 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 TAL1P17542 331 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 CCDC96Q2M329 555 aa16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 TKFCQ3LXA3 575 aa16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 SYDE2Q5VT97 1194 aa16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 NECAB2Q7Z6G3 386 aa16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 ESYT1Q9BSJ8 1104 aa16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 CTDP1Q9Y5B0 961 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-204ENST00000449062 TRIOBPQ9H2D6 2365 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 E7EWF7 191 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 SEPT4O43236 478 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 MSCO60682 206 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 ICAM1P05362 532 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 ZNF865P0CJ78 1059 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 IKQ13123 557 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 PNMA1Q8ND90 353 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 TRERF1Q96PN7 1200 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 HTATIP2Q9BUP3 242 aa16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 A1CFQ9NQ94 594 aaKnown RBP16.52■□□□□ 0.24
RTFDC1-204ENST00000449062 PFASO15067 1338 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 TNKSO95271 1327 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 H0YGN5 161 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 CNGA1P29973 690 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 CNTN2Q02246 1040 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 GPATCH4Q5T3I0 446 aaKnown RBP16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 CCDC174Q6PII3 467 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 ANKRD35Q8N283 1001 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 ACAD9Q9H845 621 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 RNF146Q9NTX7 359 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 RBM8AQ9Y5S9 174 aaKnown RBP16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 LAMA4Q16363 1823 aa16.51■□□□□ 0.23
RTFDC1-204ENST00000449062 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 GOLGA8HP0CJ92 632 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 ALAS1P13196 640 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 COL9A3Q14050 684 aaPredicted RBP16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 NECTIN1Q15223 517 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 DPF3Q92784 378 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 CCDC136Q96JN2 1154 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 CPVLQ9H3G5 476 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 KAT14Q9H8E8 782 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 HOMER2Q9NSB8 354 aa16.5■□□□□ 0.23
RTFDC1-204ENST00000449062 ASTN1O14525 1302 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 SYNGAP1Q96PV0 1343 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 ANTXR2P58335 489 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 MB21D2Q8IYB1 491 aaPredicted RBP16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 IGDCC4Q8TDY8 1250 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 C11orf49Q9H6J7 331 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 CYP39A1Q9NYL5 469 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 CCPG1Q9ULG6 757 aa16.49■□□□□ 0.23
RTFDC1-204ENST00000449062 POTEB2H3BUK9 544 aa16.48■□□□□ 0.23
RTFDC1-204ENST00000449062 SLC35G1Q2M3R5 365 aa16.48■□□□□ 0.23
RTFDC1-204ENST00000449062 UBAC1Q9BSL1 405 aa16.48■□□□□ 0.23
RTFDC1-204ENST00000449062 WDR19Q8NEZ3 1342 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 PALM3A6NDB9 673 aaPredicted RBP16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 SLC27A2O14975 620 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 TRDNQ13061 729 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 IFIT1BQ5T764 474 aaKnown RBP16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 ANO1Q5XXA6 986 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 ADGRF4Q8IZF3 695 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 NCOA7Q8NI08 942 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 JMJD4Q9H9V9 463 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 DNAH12Q6ZR08 3092 aa16.47■□□□□ 0.23
RTFDC1-204ENST00000449062 DNM1LO00429 736 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 NFIBO00712 420 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 TROAPQ12815 778 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 ACVR2BQ13705 512 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 LRRC41Q15345 812 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 ASPRV1Q53RT3 343 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 GJC2Q5T442 439 aaPredicted RBP16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 ARMCX2Q7L311 632 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 CHST3Q7LGC8 479 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 RGS22Q8NE09 1264 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 MORC4Q8TE76 937 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 MTMR8Q96EF0 704 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 PURBQ96QR8 312 aaKnown RBP16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 PRO3102Q9H379 93 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 MAD2L2Q9UI95 211 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
RTFDC1-204ENST00000449062 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms