RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	FCHSD1	Q86WN1	690 aa		7.54	□□□□□ -1.2
TRIM6-205	ENST00000445329	NME9	Q86XW9	330 aa		7.54	□□□□□ -1.2
TRIM6-205	ENST00000445329	CKAP2L	Q8IYA6	745 aa		7.54	□□□□□ -1.2
TRIM6-205	ENST00000445329	MRPL46	Q9H2W6	279 aa	Known RBP	7.54	□□□□□ -1.2
TRIM6-205	ENST00000445329	GGNBP2	Q9H3C7	697 aa		7.54	□□□□□ -1.2
TRIM6-205	ENST00000445329	SLAIN2	Q9P270	581 aa		7.54	□□□□□ -1.2
TRIM6-205	ENST00000445329	CNPY2	Q9Y2B0	182 aa		7.54	□□□□□ -1.2
TRIM6-205	ENST00000445329	USP6	P35125	1406 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	POTEF	A5A3E0	1075 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	IQCA1L	A6NCM1	817 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	TEX28	O15482	410 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	DIAPH2	O60879	1101 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	VIM	P08670	466 aa	Known RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	FBLN1	P23142	703 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	HSPA4	P34932	840 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	AMPH	P49418	695 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	CNGA3	Q16281	694 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	SH2D4B	Q5SQS7	431 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ZNF804A	Q7Z570	1209 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	DAAM2	Q86T65	1068 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ZC3H15	Q8WU90	426 aa	Known RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ABTB1	Q969K4	478 aa	Predicted RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	EPSTI1	Q96J88	318 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	NAP1L3	Q99457	506 aa	Predicted RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	NRDE2	Q9H7Z3	1164 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	PARD3	Q8TEW0	1356 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	MAP3K5	Q99683	1374 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	VPS37C	A5D8V6	355 aa	Predicted RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	PSD	A5PKW4	1024 aa	Predicted RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	NPTXR	O95502	500 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	SYF2	O95926	243 aa	Known RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	CCDC159	P0C7I6	412 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	POTEI	P0CG38	1075 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	IDO1	P14902	403 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	PPFIA1	Q13136	1202 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	RASA2	Q15283	850 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	NEUROD2	Q15784	382 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	OSTM1	Q86WC4	334 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	CHCHD4	Q8N4Q1	142 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	SUN5	Q8TC36	379 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	MAML3	Q96JK9	1138 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ATAD3A	Q9NVI7	634 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	EDC4	Q6P2E9	1401 aa	Known RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	KIF20B	Q96Q89	1820 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	RPAP1	Q9BWH6	1393 aa	Predicted RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	GRIN2D	O15399	1336 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	TTC21B	Q7Z4L5	1316 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	GPR75-ASB3	A0A0A6YYF3	556 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	STAM2	O75886	525 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	TUBA1B	P68363	451 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	DDB1	Q16531	1140 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ATL3	Q6DD88	541 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ADAL	Q6DHV7	355 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	TUBA1A	Q71U36	451 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	BRINP3	Q76B58	766 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	CABP7	Q86V35	215 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	TTC39C	Q8N584	583 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	FBXW7	Q969H0	707 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	PPP2R3C	Q969Q6	453 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	FGD4	Q96M96	766 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	MUC3B	Q9H195	1237 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ACTR5	Q9H9F9	607 aa	Predicted RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	NOP53	Q9NZM5	478 aa	Known RBP	7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	CHMP2B	Q9UQN3	213 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	TTLL3	Q9Y4R7	772 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	ASB3	Q9Y575	518 aa		7.53	□□□□□ -1.2
TRIM6-205	ENST00000445329	HNRNPR	O43390	633 aa	Known RBP	7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	FIBP	O43427	364 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	ZNF131	P52739	623 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	CDK17	Q00537	523 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	AMPD3	Q01432	767 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	CYP4A11	Q02928	519 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	PPID	Q08752	370 aa	Known RBP	7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	GRAMD4	Q6IC98	578 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	ZNF554	Q86TJ5	538 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	ESX1	Q8N693	406 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	CNBD1	Q8NA66	436 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	RIN2	Q8WYP3	895 aa	Predicted RBP	7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	CLMN	Q96JQ2	1002 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	PAGR1	Q9BTK6	254 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	PUS3	Q9BZE2	481 aa	Known RBP	7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	MYPN	Q86TC9	1320 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329		A0A1W2PQ67	120 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	MTA2	O94776	668 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	GNAI3	P08754	354 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	MTTP	P55157	894 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	CRY1	Q16526	586 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	MSL1	Q68DK7	614 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	KCTD16	Q68DU8	428 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	ZNF365	Q70YC5	407 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	RSPH3	Q86UC2	560 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	GDAP1	Q8TB36	358 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	RNF25	Q96BH1	459 aa	Predicted RBP	7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	PNKP	Q96T60	521 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	CDC5L	Q99459	802 aa	Known RBP	7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	NDEL1	Q9GZM8	345 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	PLCB1	Q9NQ66	1216 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	PFDN4	Q9NQP4	134 aa		7.52	□□□□□ -1.21
TRIM6-205	ENST00000445329	ITIH6	Q6UXX5	1313 aa		7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms