RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 KIF1BPQ96EK5 621 aa17.81■□□□□ 0.44
MRPL40-202ENST00000443660 MKNK2Q9HBH9 465 aa17.81■□□□□ 0.44
MRPL40-202ENST00000443660 SLC4A7Q9Y6M7 1214 aa17.81■□□□□ 0.44
MRPL40-202ENST00000443660 ZNFX1Q9P2E3 1918 aaKnown RBP17.8■□□□□ 0.44
MRPL40-202ENST00000443660 ADCY6O43306 1168 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 TNFAIP2Q03169 654 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 PPP2R2DQ66LE6 453 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 CHST13Q8NET6 341 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 KIFC2Q96AC6 838 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 SEZ6LQ9BYH1 1024 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 BOLA2Q9H3K6 86 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 RAVER2Q9HCJ3 691 aaKnown RBP17.8■□□□□ 0.44
MRPL40-202ENST00000443660 NYAP2Q9P242 653 aa17.8■□□□□ 0.44
MRPL40-202ENST00000443660 YBX2Q9Y2T7 364 aaKnown RBP17.8■□□□□ 0.44
MRPL40-202ENST00000443660 MUC3AQ02505 3323 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 ZEB2O60315 1214 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 BMP1P13497 986 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 CCL23P55773 120 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 NKX3-2P78367 333 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 BEX3Q00994 111 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 UBE3CQ15386 1083 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 SKIV2LQ15477 1246 aaKnown RBP17.79■□□□□ 0.44
MRPL40-202ENST00000443660 ZSCAN25Q6NSZ9 544 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 CXCL17Q6UXB2 119 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 CCDC144CPQ8IYA2 1237 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.79■□□□□ 0.44
MRPL40-202ENST00000443660 AP5M1Q9H0R1 490 aa17.79■□□□□ 0.44
MRPL40-202ENST00000443660 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
MRPL40-202ENST00000443660 NDUFB10O96000 172 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 RLBP1P12271 317 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 RABGGTBP53611 331 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 ITGA7Q13683 1181 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.78■□□□□ 0.44
MRPL40-202ENST00000443660 SLC43A3Q8NBI5 491 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 SLC38A10Q9HBR0 1119 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 CLIP2Q9UDT6 1046 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 FEM1BQ9UK73 627 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 PCDHA11Q9Y5I1 949 aa17.78■□□□□ 0.44
MRPL40-202ENST00000443660 ZBBXA8MT70 800 aa17.77■□□□□ 0.44
MRPL40-202ENST00000443660 CTAGE5O15320 804 aa17.77■□□□□ 0.44
MRPL40-202ENST00000443660 OAZ1P54368 228 aa17.77■□□□□ 0.44
MRPL40-202ENST00000443660 NECAB3Q96P71 396 aaPredicted RBP17.77■□□□□ 0.44
MRPL40-202ENST00000443660 BDP1A6H8Y1 2624 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 ASB14A6NK59 587 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 GTPBP6O43824 516 aaPredicted RBP17.76■□□□□ 0.43
MRPL40-202ENST00000443660 FDX1P10109 184 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 ATP5JP18859 108 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 TFF2Q03403 129 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 FSCN1Q16658 493 aaKnown RBP17.76■□□□□ 0.43
MRPL40-202ENST00000443660 STK11IPQ8N1F8 1099 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 FGD4Q96M96 766 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 NOC4LQ9BVI4 516 aaKnown RBP17.76■□□□□ 0.43
MRPL40-202ENST00000443660 TRPV6Q9H1D0 765 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 CHD9Q3L8U1 2897 aa17.76■□□□□ 0.43
MRPL40-202ENST00000443660 PLXNA1Q9UIW2 1896 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 UMODL1Q5DID0 1318 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 ZBED9Q6R2W3 1325 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 MINDY4BA8MYZ0 360 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 ERC2O15083 957 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 DYNC1LI2O43237 492 aaPredicted RBP17.75■□□□□ 0.43
MRPL40-202ENST00000443660 RAB11FIP3O75154 756 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 HMMRO75330 724 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 ATP2A2P16615 1042 aaKnown RBP17.75■□□□□ 0.43
MRPL40-202ENST00000443660 RASA1P20936 1047 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 CNTN2Q02246 1040 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 SBK1Q52WX2 424 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 TLK2Q86UE8 772 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 ZNF444Q8N0Y2 327 aaPredicted RBP17.75■□□□□ 0.43
MRPL40-202ENST00000443660 HAUS7Q99871 368 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 KATNBL1Q9H079 304 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 ZNF287Q9HBT7 754 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 HOMER2Q9NSB8 354 aa17.75■□□□□ 0.43
MRPL40-202ENST00000443660 COL11A1P12107 1806 aaPredicted RBP17.75■□□□□ 0.43
MRPL40-202ENST00000443660 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.74■□□□□ 0.43
MRPL40-202ENST00000443660 CCER2I3L3R5 266 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 MYOGP15173 224 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 TMEM67Q5HYA8 995 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 IQSEC1Q6DN90 963 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 RPAP2Q8IXW5 612 aaPredicted RBP17.74■□□□□ 0.43
MRPL40-202ENST00000443660 MKL1Q969V6 931 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 PUS7LQ9H0K6 701 aaKnown RBP17.74■□□□□ 0.43
MRPL40-202ENST00000443660 ACAD9Q9H845 621 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
MRPL40-202ENST00000443660 COG6Q9Y2V7 657 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 HCN4Q9Y3Q4 1203 aa17.74■□□□□ 0.43
MRPL40-202ENST00000443660 ARIH1Q9Y4X5 557 aaPredicted RBP17.74■□□□□ 0.43
MRPL40-202ENST00000443660 PARP14Q460N5 1801 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 B4GALT4O60513 344 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 CHGBP05060 677 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 PFKMP08237 780 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 SUPT20HL2P0C7V6 817 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 HOXD11P31277 338 aaPredicted RBP17.73■□□□□ 0.43
MRPL40-202ENST00000443660 KCNQ1P51787 676 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 FAM133AQ8N9E0 248 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 ISY1Q9ULR0 285 aaKnown RBP17.73■□□□□ 0.43
MRPL40-202ENST00000443660 SYNPO2Q9UMS6 1093 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 COG5Q9UP83 839 aa17.73■□□□□ 0.43
MRPL40-202ENST00000443660 ASTN1O14525 1302 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms