RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ASB14A6NK59 587 aa16.38■□□□□ 0.21
PTPRE-203ENST00000442830 PQBP1O60828 265 aaKnown RBP16.38■□□□□ 0.21
PTPRE-203ENST00000442830 SNAI1O95863 264 aaPredicted RBP16.38■□□□□ 0.21
PTPRE-203ENST00000442830 TAL1P17542 331 aaPredicted RBP16.38■□□□□ 0.21
PTPRE-203ENST00000442830 FPGSQ05932 587 aa16.38■□□□□ 0.21
PTPRE-203ENST00000442830 PPARAQ07869 468 aa16.38■□□□□ 0.21
PTPRE-203ENST00000442830 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
PTPRE-203ENST00000442830 ZMYM1Q5SVZ6 1142 aa16.38■□□□□ 0.21
PTPRE-203ENST00000442830 RNPC3Q96LT9 517 aaKnown RBP16.38■□□□□ 0.21
PTPRE-203ENST00000442830 GUCD1Q96NT3 240 aa16.38■□□□□ 0.21
PTPRE-203ENST00000442830 UPF3AQ9H1J1 476 aaKnown RBP16.38■□□□□ 0.21
PTPRE-203ENST00000442830 RAVER2Q9HCJ3 691 aaKnown RBP16.38■□□□□ 0.21
PTPRE-203ENST00000442830 RIPK3Q9Y572 518 aa16.38■□□□□ 0.21
PTPRE-203ENST00000442830 PRDM1O75626 825 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 MX1P20591 662 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 SLC1A4P43007 532 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 GJA9P57773 515 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 TFAP4Q01664 338 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 KCNA10Q16322 511 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 TSHZ3Q63HK5 1081 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 LRRC47Q8N1G4 583 aaKnown RBP16.37■□□□□ 0.21
PTPRE-203ENST00000442830 PI4K2BQ8TCG2 481 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 STAG1Q8WVM7 1258 aa16.37■□□□□ 0.21
PTPRE-203ENST00000442830 ISY1Q9ULR0 285 aaKnown RBP16.37■□□□□ 0.21
PTPRE-203ENST00000442830 A0A0U1RQG5 324 aaPredicted RBP16.36■□□□□ 0.21
PTPRE-203ENST00000442830 TSPY2A6NKD2 308 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 TMEM232C9JQI7 657 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 TLR3O15455 904 aaKnown RBP16.36■□□□□ 0.21
PTPRE-203ENST00000442830 CABYRO75952 493 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 C6orf222P0C671 652 aaPredicted RBP16.36■□□□□ 0.21
PTPRE-203ENST00000442830 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 NKX3-2P78367 333 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 C9orf50Q5SZB4 431 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 CCSAPQ6IQ19 270 aaPredicted RBP16.36■□□□□ 0.21
PTPRE-203ENST00000442830 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 ARMCX2Q7L311 632 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 PNMA2Q9UL42 364 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
PTPRE-203ENST00000442830 ZEB2O60315 1214 aa16.35■□□□□ 0.21
PTPRE-203ENST00000442830 TIMP1P01033 207 aa16.35■□□□□ 0.21
PTPRE-203ENST00000442830 FAAP100Q0VG06 881 aa16.35■□□□□ 0.21
PTPRE-203ENST00000442830 PPIGQ13427 754 aaKnown RBP eCLIP16.35■□□□□ 0.21
PTPRE-203ENST00000442830 CCDC144BQ3MJ40 725 aa16.35■□□□□ 0.21
PTPRE-203ENST00000442830 RCSD1Q6JBY9 416 aa16.35■□□□□ 0.21
PTPRE-203ENST00000442830 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.35■□□□□ 0.21
PTPRE-203ENST00000442830 SEMA6BQ9H3T3 888 aa16.35■□□□□ 0.21
PTPRE-203ENST00000442830 LOC102724159A0A0B4J2E5 919 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.34■□□□□ 0.21
PTPRE-203ENST00000442830 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.34■□□□□ 0.21
PTPRE-203ENST00000442830 ASGR1P07306 291 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 PWP2Q15269 919 aaKnown RBP16.34■□□□□ 0.21
PTPRE-203ENST00000442830 FAM133AQ8N9E0 248 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 VTI1AQ96AJ9 217 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 EVI5LQ96CN4 794 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 RNF146Q9NTX7 359 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 ANAPC4Q9UJX5 808 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 STX8Q9UNK0 236 aa16.34■□□□□ 0.21
PTPRE-203ENST00000442830 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTPRE-203ENST00000442830 ARVCFO00192 962 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 ORC4O43929 436 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 PCP11498 1178 aaKnown RBP16.33■□□□□ 0.2
PTPRE-203ENST00000442830 NT5C2P49902 561 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 GNASQ5JWF2 1037 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 MFSD5Q6N075 450 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 TMEM199Q8N511 208 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 DCAF4Q8WV16 495 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 LENG1Q96BZ8 264 aaPredicted RBP16.33■□□□□ 0.2
PTPRE-203ENST00000442830 FAM161BQ96MY7 647 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 CDX2Q99626 313 aaPredicted RBP16.33■□□□□ 0.2
PTPRE-203ENST00000442830 MTIF3Q9H2K0 278 aaKnown RBP16.33■□□□□ 0.2
PTPRE-203ENST00000442830 A1CFQ9NQ94 594 aaKnown RBP16.33■□□□□ 0.2
PTPRE-203ENST00000442830 HELLSQ9NRZ9 838 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 HOMER2Q9NSB8 354 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 TBX21Q9UL17 535 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 Q9Y3F1 56 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 LRRC37A2A6NM11 1700 aa16.33■□□□□ 0.2
PTPRE-203ENST00000442830 CDK7P50613 346 aa16.32■□□□□ 0.2
PTPRE-203ENST00000442830 TNFAIP2Q03169 654 aa16.32■□□□□ 0.2
PTPRE-203ENST00000442830 AAMPQ13685 434 aa16.32■□□□□ 0.2
PTPRE-203ENST00000442830 ALX1Q15699 326 aa16.32■□□□□ 0.2
PTPRE-203ENST00000442830 PSRC1Q6PGN9 363 aaPredicted RBP16.32■□□□□ 0.2
PTPRE-203ENST00000442830 MAFAQ8NHW3 353 aaPredicted RBP16.32■□□□□ 0.2
PTPRE-203ENST00000442830 FGD4Q96M96 766 aa16.32■□□□□ 0.2
PTPRE-203ENST00000442830 TRERF1Q96PN7 1200 aa16.32■□□□□ 0.2
PTPRE-203ENST00000442830 SEC62Q99442 399 aaKnown RBP16.32■□□□□ 0.2
PTPRE-203ENST00000442830 AP5M1Q9H0R1 490 aa16.32■□□□□ 0.2
PTPRE-203ENST00000442830 ZMYM6O95789 1325 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 RANBP6O60518 1105 aaKnown RBP16.31■□□□□ 0.2
PTPRE-203ENST00000442830 ALAS1P13196 640 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 MCCP23508 829 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 ITGB8P26012 769 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 NOVP48745 357 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 IQSEC1Q6DN90 963 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
PTPRE-203ENST00000442830 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
PTPRE-203ENST00000442830 KATNBL1Q9H079 304 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 VTA1Q9NP79 307 aa16.31■□□□□ 0.2
PTPRE-203ENST00000442830 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms