RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 COLQQ9Y215 455 aaPredicted RBP20.69■□□□□ 0.9
CCDC188-201ENST00000439765 RANBP2P49792 3224 aaKnown RBP20.69■□□□□ 0.9
CCDC188-201ENST00000439765 ERICH2A1L162 156 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 ZBED4O75132 1171 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 GOLGA8HP0CJ92 632 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 SNHG28P0DPA3 235 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 SNAP25P60880 206 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 ZNF543Q08ER8 600 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 CCL14Q16627 93 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 PAWRQ96IZ0 340 aaKnown RBP20.69■□□□□ 0.9
CCDC188-201ENST00000439765 MROH8Q9H579 483 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 NR2E3Q9Y5X4 410 aa20.69■□□□□ 0.9
CCDC188-201ENST00000439765 EPB41L2O43491 1005 aaKnown RBP20.68■□□□□ 0.9
CCDC188-201ENST00000439765 PLA2G6O60733 806 aa20.68■□□□□ 0.9
CCDC188-201ENST00000439765 CACNB2Q08289 660 aaPredicted RBP20.68■□□□□ 0.9
CCDC188-201ENST00000439765 SART3Q15020 963 aaKnown RBP20.68■□□□□ 0.9
CCDC188-201ENST00000439765 TMEM67Q5HYA8 995 aa20.68■□□□□ 0.9
CCDC188-201ENST00000439765 NECAB2Q7Z6G3 386 aa20.68■□□□□ 0.9
CCDC188-201ENST00000439765 DIS3LQ8TF46 1054 aaKnown RBP20.68■□□□□ 0.9
CCDC188-201ENST00000439765 USP26Q9BXU7 913 aa20.68■□□□□ 0.9
CCDC188-201ENST00000439765 SENP2Q9HC62 589 aa20.68■□□□□ 0.9
CCDC188-201ENST00000439765 SLC25A27O95847 323 aa20.67■□□□□ 0.9
CCDC188-201ENST00000439765 MNX1P50219 401 aaPredicted RBP20.67■□□□□ 0.9
CCDC188-201ENST00000439765 WTAPQ15007 396 aa20.67■□□□□ 0.9
CCDC188-201ENST00000439765 SYDE2Q5VT97 1194 aa20.67■□□□□ 0.9
CCDC188-201ENST00000439765 CCDC174Q6PII3 467 aa20.67■□□□□ 0.9
CCDC188-201ENST00000439765 RASEFQ8IZ41 740 aa20.67■□□□□ 0.9
CCDC188-201ENST00000439765 RIPK3Q9Y572 518 aa20.67■□□□□ 0.9
CCDC188-201ENST00000439765 PRC1O43663 620 aa20.66■□□□□ 0.9
CCDC188-201ENST00000439765 ADORA2AP29274 412 aa20.66■□□□□ 0.9
CCDC188-201ENST00000439765 CPVLQ9H3G5 476 aa20.66■□□□□ 0.9
CCDC188-201ENST00000439765 HOMER2Q9NSB8 354 aa20.66■□□□□ 0.9
CCDC188-201ENST00000439765 ATP2A1O14983 1001 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 STRNO43815 780 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 TAL1P17542 331 aaPredicted RBP20.65■□□□□ 0.9
CCDC188-201ENST00000439765 MCM5P33992 734 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 COPB2P35606 906 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 GPATCH4Q5T3I0 446 aaKnown RBP20.65■□□□□ 0.9
CCDC188-201ENST00000439765 BTNL9Q6UXG8 535 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 GPHNQ9NQX3 736 aaPredicted RBP20.65■□□□□ 0.9
CCDC188-201ENST00000439765 FLRT1Q9NZU1 646 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 LCTP09848 1927 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 ZNF536O15090 1300 aa20.65■□□□□ 0.9
CCDC188-201ENST00000439765 EVI5O60447 810 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 IGHA2P01877 340 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 FDX1P10109 184 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 FCER1AP12319 257 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 CCND3P30281 292 aaPredicted RBP20.64■□□□□ 0.89
CCDC188-201ENST00000439765 OAZ1P54368 228 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 ADCK5Q3MIX3 580 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 ASPRV1Q53RT3 343 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 AGBL1Q96MI9 1066 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 MMP19Q99542 508 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 LRRC2Q9BYS8 371 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 PCDH10Q9P2E7 1040 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 MCM3APO60318 1980 aa20.64■□□□□ 0.89
CCDC188-201ENST00000439765 PARP1P09874 1014 aaKnown RBP20.63■□□□□ 0.89
CCDC188-201ENST00000439765 FXR1P51114 621 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCDC188-201ENST00000439765 MFSD14CQ5VZR4 134 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 LHX8Q68G74 356 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 CHRDL2Q6WN34 429 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 DPP9Q86TI2 863 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 NPLOC4Q8TAT6 608 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 IGDCC4Q8TDY8 1250 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 NEK1Q96PY6 1258 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 UBA5Q9GZZ9 404 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 RANBP17Q9H2T7 1088 aaKnown RBP20.63■□□□□ 0.89
CCDC188-201ENST00000439765 PRO3102Q9H379 93 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 UPF2Q9HAU5 1272 aaKnown RBP20.63■□□□□ 0.89
CCDC188-201ENST00000439765 LY9Q9HBG7 655 aa20.63■□□□□ 0.89
CCDC188-201ENST00000439765 HSPA4P34932 840 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 KCTD2Q14681 263 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 TCEANC2Q96MN5 208 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 CCPG1Q9ULG6 757 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 SH2B2O14492 632 aaPredicted RBP20.62■□□□□ 0.89
CCDC188-201ENST00000439765 COBLO75128 1261 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 PGK2P07205 417 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 ALAS1P13196 640 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 KRT32Q14532 448 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 ABRAQ8N0Z2 381 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 STAG2Q8N3U4 1231 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 C11orf49Q9H6J7 331 aa20.62■□□□□ 0.89
CCDC188-201ENST00000439765 BAZ2BQ9UIF8 2168 aaKnown RBP20.61■□□□□ 0.89
CCDC188-201ENST00000439765 DHX16O60231 1041 aaKnown RBP20.61■□□□□ 0.89
CCDC188-201ENST00000439765 TSGA10IPQ3SY00 556 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 OLFML2BQ68BL8 750 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 NFXL1Q6ZNB6 911 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 CATIPQ7Z7H3 387 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 TMEM87BQ96K49 555 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 MYL10Q9BUA6 226 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 RNF146Q9NTX7 359 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 SNX14Q9Y5W7 946 aa20.61■□□□□ 0.89
CCDC188-201ENST00000439765 MSCO60682 206 aa20.6■□□□□ 0.89
CCDC188-201ENST00000439765 ICAM1P05362 532 aa20.6■□□□□ 0.89
CCDC188-201ENST00000439765 COL6A1P12109 1028 aa20.6■□□□□ 0.89
CCDC188-201ENST00000439765 ZNF654Q8IZM8 581 aa20.6■□□□□ 0.89
CCDC188-201ENST00000439765 NUP133Q8WUM0 1156 aa20.6■□□□□ 0.89
CCDC188-201ENST00000439765 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
CCDC188-201ENST00000439765 C22orf23Q9BZE7 217 aa20.6■□□□□ 0.89
CCDC188-201ENST00000439765 MAD2L2Q9UI95 211 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms