RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SENP2Q9HC62 589 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 MAD2L2Q9UI95 211 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 RIPK3Q9Y572 518 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 ZNF536O15090 1300 aa13.79□□□□□ -0.2
HSPG2-206ENST00000439717 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 HMGCRP04035 888 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 CALM1P0DP23 149 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 CALM2P0DP24 149 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 CALM3P0DP25 149 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 ELNP15502 786 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 COL9A3Q14050 684 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-206ENST00000439717 CCDC174Q6PII3 467 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 NFXL1Q6ZNB6 911 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 SGMS1Q86VZ5 419 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 ZNF654Q8IZM8 581 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 AGBL1Q96MI9 1066 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
HSPG2-206ENST00000439717 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
HSPG2-206ENST00000439717 DOCK3Q8IZD9 2030 aa13.78□□□□□ -0.2
HSPG2-206ENST00000439717 INHAP05111 366 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 KIF5BP33176 963 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 SLC4A3P48751 1232 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 SNAP25P60880 206 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 IFFO2Q5TF58 517 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 BLOC1S2Q6QNY1 142 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 STAG2Q8N3U4 1231 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 TRIB2Q92519 343 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 ACAD9Q9H845 621 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 GPHNQ9NQX3 736 aaPredicted RBP13.77□□□□□ -0.21
HSPG2-206ENST00000439717 CCPG1Q9ULG6 757 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 DIS3Q9Y2L1 958 aaKnown RBP13.77□□□□□ -0.21
HSPG2-206ENST00000439717 SLC12A7Q9Y666 1083 aa13.77□□□□□ -0.21
HSPG2-206ENST00000439717 COBLO75128 1261 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 ALAS1P13196 640 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 RPS6KB1P23443 525 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 GNAQP50148 359 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 OLFML2BQ68BL8 750 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 SYNE3Q6ZMZ3 975 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 FBXL16Q8N461 479 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-206ENST00000439717 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 DDX11Q96FC9 970 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 TRERF1Q96PN7 1200 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 LZTS2Q9BRK4 669 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 LRRC2Q9BYS8 371 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 TM6SF1Q9BZW5 370 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 MAF1Q9H063 256 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 CPVLQ9H3G5 476 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 RNF146Q9NTX7 359 aa13.76□□□□□ -0.21
HSPG2-206ENST00000439717 DNAJC25-GNG10A0A024R161 153 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 DHX16O60231 1041 aaKnown RBP13.75□□□□□ -0.21
HSPG2-206ENST00000439717 CASTP20810 708 aaKnown RBP13.75□□□□□ -0.21
HSPG2-206ENST00000439717 SMARCA1P28370 1054 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 ANAPC15P60006 121 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 FGD1P98174 961 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 CDC37Q16543 378 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-206ENST00000439717 CCL14Q16627 93 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 ZNF792Q3KQV3 632 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 MFSD14CQ5VZR4 134 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 ANKRD35Q8N283 1001 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 NPLOC4Q8TAT6 608 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 MTMR8Q96EF0 704 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 TMEM106CQ9BVX2 250 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 RIOX1Q9H6W3 641 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 JMJD4Q9H9V9 463 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 HOMER2Q9NSB8 354 aa13.75□□□□□ -0.21
HSPG2-206ENST00000439717 PFASO15067 1338 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 IGHA2P01877 340 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 PGK2P07205 417 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 CCL5P13501 91 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 RCAN1P53805 252 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 TRAF1Q13077 416 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 MTFR1Q15390 333 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 QRICH1Q2TAL8 776 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 MAP3K21Q5TCX8 1036 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 RUFY3Q7L099 469 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 MSL3Q8N5Y2 521 aaKnown RBP13.74□□□□□ -0.21
HSPG2-206ENST00000439717 MAML3Q96JK9 1138 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 TCEANC2Q96MN5 208 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 VAT1LQ9HCJ6 419 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 FLRT1Q9NZU1 646 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
HSPG2-206ENST00000439717 ABCB11O95342 1321 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 RPTORQ8N122 1335 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 ZBTB5O15062 677 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 CAPN15O75808 1086 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 CPA1P15085 419 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 CAPN2P17655 700 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 C8orf34Q49A92 452 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 MUM1L1Q5H9M0 696 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 Q6ZUG5 572 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
HSPG2-206ENST00000439717 FBXO11Q86XK2 927 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 FANCBQ8NB91 859 aa13.73□□□□□ -0.21
HSPG2-206ENST00000439717 IL17RAQ96F46 866 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms