RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 USP17L3A6NCW0 530 aa17.28■□□□□ 0.36
APP-208ENST00000439274 USP17L4A6NCW7 530 aa17.28■□□□□ 0.36
APP-208ENST00000439274 LGALS16A8MUM7 142 aa17.28■□□□□ 0.36
APP-208ENST00000439274 POTEB2H3BUK9 544 aa17.28■□□□□ 0.36
APP-208ENST00000439274 KLRC4O43908 158 aa17.28■□□□□ 0.36
APP-208ENST00000439274 TUBB2AQ13885 445 aa17.28■□□□□ 0.36
APP-208ENST00000439274 USP17L1Q7RTZ2 530 aa17.28■□□□□ 0.36
APP-208ENST00000439274 HDXQ7Z353 690 aa17.28■□□□□ 0.36
APP-208ENST00000439274 TXLNBQ8N3L3 684 aa17.28■□□□□ 0.36
APP-208ENST00000439274 TRIM47Q96LD4 638 aa17.28■□□□□ 0.36
APP-208ENST00000439274 TUBB2BQ9BVA1 445 aa17.28■□□□□ 0.36
APP-208ENST00000439274 PCDHA6Q9UN73 950 aa17.28■□□□□ 0.36
APP-208ENST00000439274 PCDHA8Q9Y5H6 950 aa17.28■□□□□ 0.36
APP-208ENST00000439274 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
APP-208ENST00000439274 LMAN1P49257 510 aa17.27■□□□□ 0.36
APP-208ENST00000439274 HERVK_113P62684 666 aa17.27■□□□□ 0.36
APP-208ENST00000439274 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.36
APP-208ENST00000439274 WDR59Q6PJI9 974 aa17.27■□□□□ 0.36
APP-208ENST00000439274 OR8K1Q8NGG5 319 aa17.27■□□□□ 0.36
APP-208ENST00000439274 VPS18Q9P253 973 aa17.27■□□□□ 0.36
APP-208ENST00000439274 MYO1AQ9UBC5 1043 aa17.27■□□□□ 0.36
APP-208ENST00000439274 LUC7L2Q9Y383 392 aaKnown RBP17.27■□□□□ 0.36
APP-208ENST00000439274 LAMB1P07942 1786 aa17.27■□□□□ 0.36
APP-208ENST00000439274 B4DLN1 442 aa17.27■□□□□ 0.36
APP-208ENST00000439274 M0R2N6 131 aa17.27■□□□□ 0.36
APP-208ENST00000439274 ERLIN1O75477 346 aa17.27■□□□□ 0.36
APP-208ENST00000439274 KLK7P49862 253 aa17.27■□□□□ 0.36
APP-208ENST00000439274 SBK1Q52WX2 424 aa17.27■□□□□ 0.36
APP-208ENST00000439274 HEATR3Q7Z4Q2 680 aa17.27■□□□□ 0.36
APP-208ENST00000439274 ZNF507Q8TCN5 953 aa17.27■□□□□ 0.36
APP-208ENST00000439274 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.35
APP-208ENST00000439274 SRGAP2O75044 1071 aa17.26■□□□□ 0.35
APP-208ENST00000439274 UBA7P41226 1012 aa17.26■□□□□ 0.35
APP-208ENST00000439274 GPS2Q13227 327 aa17.26■□□□□ 0.35
APP-208ENST00000439274 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
APP-208ENST00000439274 CPVLQ9H3G5 476 aa17.26■□□□□ 0.35
APP-208ENST00000439274 MAD2L2Q9UI95 211 aa17.26■□□□□ 0.35
APP-208ENST00000439274 CYTH3O43739 400 aa17.26■□□□□ 0.35
APP-208ENST00000439274 RPS8P62241 208 aaKnown RBP17.26■□□□□ 0.35
APP-208ENST00000439274 CLEC4GQ6UXB4 293 aa17.26■□□□□ 0.35
APP-208ENST00000439274 PTF1AQ7RTS3 328 aa17.26■□□□□ 0.35
APP-208ENST00000439274 DNAJC7Q99615 494 aa17.26■□□□□ 0.35
APP-208ENST00000439274 CASZ1Q86V15 1759 aa17.26■□□□□ 0.35
APP-208ENST00000439274 ATP1A1P05023 1023 aaKnown RBP17.25■□□□□ 0.35
APP-208ENST00000439274 GOLGA8HP0CJ92 632 aa17.25■□□□□ 0.35
APP-208ENST00000439274 PDS5AQ29RF7 1337 aaKnown RBP17.25■□□□□ 0.35
APP-208ENST00000439274 SLC44A5Q8NCS7 719 aa17.25■□□□□ 0.35
APP-208ENST00000439274 AGPAT5Q9NUQ2 364 aa17.25■□□□□ 0.35
APP-208ENST00000439274 IRX5P78411 483 aaPredicted RBP17.25■□□□□ 0.35
APP-208ENST00000439274 CASP8Q14790 479 aa17.25■□□□□ 0.35
APP-208ENST00000439274 TTI2Q6NXR4 508 aa17.25■□□□□ 0.35
APP-208ENST00000439274 DZIP1Q86YF9 867 aaKnown RBP17.25■□□□□ 0.35
APP-208ENST00000439274 SH3GLB2Q9NR46 395 aa17.25■□□□□ 0.35
APP-208ENST00000439274 CAPN11Q9UMQ6 739 aa17.25■□□□□ 0.35
APP-208ENST00000439274 NKRFO15226 690 aaKnown RBP eCLIP17.24■□□□□ 0.35
APP-208ENST00000439274 EEF1GP26641 437 aaKnown RBP17.24■□□□□ 0.35
APP-208ENST00000439274 GRM4Q14833 912 aa17.24■□□□□ 0.35
APP-208ENST00000439274 CCDC122Q5T0U0 273 aa17.24■□□□□ 0.35
APP-208ENST00000439274 TRAPPC11Q7Z392 1133 aa17.24■□□□□ 0.35
APP-208ENST00000439274 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
APP-208ENST00000439274 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
APP-208ENST00000439274 DUSP9Q99956 384 aaKnown RBP17.24■□□□□ 0.35
APP-208ENST00000439274 THAP9Q9H5L6 903 aa17.24■□□□□ 0.35
APP-208ENST00000439274 KBTBD4Q9NVX7 518 aa17.24■□□□□ 0.35
APP-208ENST00000439274 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
APP-208ENST00000439274 NHSQ6T4R5 1651 aa17.24■□□□□ 0.35
APP-208ENST00000439274 AFF2P51816 1311 aa17.24■□□□□ 0.35
APP-208ENST00000439274 A0A1W2PQC6 194 aa17.24■□□□□ 0.35
APP-208ENST00000439274 RCCD1A6NED2 376 aa17.24■□□□□ 0.35
APP-208ENST00000439274 RASSF10A6NK89 507 aa17.24■□□□□ 0.35
APP-208ENST00000439274 PSMA7O14818 248 aa17.24■□□□□ 0.35
APP-208ENST00000439274 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
APP-208ENST00000439274 KCNB1Q14721 858 aa17.24■□□□□ 0.35
APP-208ENST00000439274 C12orf60Q5U649 245 aa17.24■□□□□ 0.35
APP-208ENST00000439274 SH3RF3Q8TEJ3 882 aaPredicted RBP17.24■□□□□ 0.35
APP-208ENST00000439274 CAPZA3Q96KX2 299 aa17.24■□□□□ 0.35
APP-208ENST00000439274 MMS19Q96T76 1030 aa17.24■□□□□ 0.35
APP-208ENST00000439274 MAGEC2Q9UBF1 373 aaPredicted RBP17.24■□□□□ 0.35
APP-208ENST00000439274 ZNF831Q5JPB2 1677 aa17.24■□□□□ 0.35
APP-208ENST00000439274 LRRIQ3A6PVS8 624 aaPredicted RBP17.23■□□□□ 0.35
APP-208ENST00000439274 STXBP3O00186 592 aa17.23■□□□□ 0.35
APP-208ENST00000439274 PSMD14O00487 310 aa17.23■□□□□ 0.35
APP-208ENST00000439274 PHACTR2O75167 634 aa17.23■□□□□ 0.35
APP-208ENST00000439274 PLCG1P19174 1290 aa17.23■□□□□ 0.35
APP-208ENST00000439274 ZSCAN26Q16670 478 aa17.23■□□□□ 0.35
APP-208ENST00000439274 DGKHQ86XP1 1220 aa17.23■□□□□ 0.35
APP-208ENST00000439274 CSGALNACT2Q8N6G5 542 aa17.23■□□□□ 0.35
APP-208ENST00000439274 TUBGCP2Q9BSJ2 902 aa17.23■□□□□ 0.35
APP-208ENST00000439274 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
APP-208ENST00000439274 MKNK2Q9HBH9 465 aa17.23■□□□□ 0.35
APP-208ENST00000439274 BTAF1O14981 1849 aa17.23■□□□□ 0.35
APP-208ENST00000439274 STIM1Q13586 685 aa17.23■□□□□ 0.35
APP-208ENST00000439274 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
APP-208ENST00000439274 CCDC178Q5BJE1 867 aa17.23■□□□□ 0.35
APP-208ENST00000439274 LACRTQ9GZZ8 138 aa17.23■□□□□ 0.35
APP-208ENST00000439274 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
APP-208ENST00000439274 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
APP-208ENST00000439274 RAD51AP2Q09MP3 1159 aa17.22■□□□□ 0.35
APP-208ENST00000439274 DIXDC1Q155Q3 683 aa17.22■□□□□ 0.35
APP-208ENST00000439274 GRIK5Q16478 980 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms