RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 PDZD8Q8NEN9 1154 aa15.12■□□□□ 0.01
LRCH3-206ENST00000438796 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
LRCH3-206ENST00000438796 SLC39A2Q9NP94 309 aa15.12■□□□□ 0.01
LRCH3-206ENST00000438796 A6NJR5 290 aa15.12■□□□□ 0.01
LRCH3-206ENST00000438796 RPS8P62241 208 aaKnown RBP15.12■□□□□ 0.01
LRCH3-206ENST00000438796 MMEL1Q495T6 779 aa15.12■□□□□ 0.01
LRCH3-206ENST00000438796 TBC1D22AQ8WUA7 517 aa15.12■□□□□ 0.01
LRCH3-206ENST00000438796 ZSCAN10Q96SZ4 725 aaPredicted RBP15.12■□□□□ 0.01
LRCH3-206ENST00000438796 AP5M1Q9H0R1 490 aa15.12■□□□□ 0.01
LRCH3-206ENST00000438796 POLIQ9UNA4 740 aa15.12■□□□□ 0.01
LRCH3-206ENST00000438796 KRT71Q3SY84 523 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 FAM178BQ8IXR5 827 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 BANK1Q8NDB2 785 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 STX2P32856 288 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 KCNQ4P56696 695 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 PABPC4Q13310 644 aaKnown RBP eCLIP15.11■□□□□ 0.01
LRCH3-206ENST00000438796 PRPSAP1Q14558 356 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 ATL3Q6DD88 541 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 RSRC2Q7L4I2 434 aaKnown RBP15.11■□□□□ 0.01
LRCH3-206ENST00000438796 ZNF654Q8IZM8 581 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.11■□□□□ 0.01
LRCH3-206ENST00000438796 OSTNP61366 133 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 PI4K2BQ8TCG2 481 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 METTL14Q9HCE5 456 aaKnown RBP15.11■□□□□ 0.01
LRCH3-206ENST00000438796 ARPP21Q9UBL0 812 aaPredicted RBP15.11■□□□□ 0.01
LRCH3-206ENST00000438796 SESN3P58005 492 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 ICA1Q05084 483 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 RFX6Q8HWS3 928 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 MRPL46Q9H2W6 279 aaKnown RBP15.11■□□□□ 0.01
LRCH3-206ENST00000438796 KRIT1O00522 736 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 KRT33BQ14525 404 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 RMDN2Q96LZ7 410 aa15.11■□□□□ 0.01
LRCH3-206ENST00000438796 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 MARK3P27448 753 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 ZBTB33Q86T24 672 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 KBTBD3Q8NAB2 608 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
LRCH3-206ENST00000438796 MAP3K1Q13233 1512 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 TYW5A2RUC4 315 aaKnown RBP15.1■□□□□ 0.01
LRCH3-206ENST00000438796 ZNF853P0CG23 659 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 LLPHQ9BRT6 129 aaKnown RBP15.1■□□□□ 0.01
LRCH3-206ENST00000438796 SMIM24O75264 130 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 POLR2FP61218 127 aaKnown RBP15.1■□□□□ 0.01
LRCH3-206ENST00000438796 MORC3Q14149 939 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 LLGL1Q15334 1064 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 MYSM1Q5VVJ2 828 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 CERS3Q8IU89 383 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 MLKLQ8NB16 471 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 NLRP7Q8WX94 980 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 NCAPGQ9BPX3 1015 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 DDX41Q9UJV9 622 aaKnown RBP15.1■□□□□ 0.01
LRCH3-206ENST00000438796 RGS16O15492 202 aaPredicted RBP15.1■□□□□ 0.01
LRCH3-206ENST00000438796 TRIM68Q6AZZ1 485 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 MYOCDQ8IZQ8 938 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 CDC26Q8NHZ8 85 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 SPDL1Q96EA4 605 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 NT5C3AQ9H0P0 336 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 KCNJ18B7U540 433 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 PHBP35232 272 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 KCNJ12Q14500 433 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 ABCB5Q2M3G0 1257 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 FAM160B1Q5W0V3 765 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 SGK1O00141 431 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 LMCD1Q9NZU5 365 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 MOSPD1Q9UJG1 213 aa15.1■□□□□ 0.01
LRCH3-206ENST00000438796 DUOX2Q9NRD8 1548 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 OSBPP22059 807 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 PAK2Q13177 524 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 RINT1Q6NUQ1 792 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 PSPC1Q8WXF1 523 aaKnown RBP15.09■□□□□ 0.01
LRCH3-206ENST00000438796 RIC8AQ9NPQ8 531 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 RAPGEF6Q8TEU7 1601 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 TUBB4AP04350 444 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 C7orf31Q8N865 590 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 DBNDD1Q9H9R9 158 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 ATP8A2Q9NTI2 1148 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 PPEF1O14829 653 aaPredicted RBP15.09■□□□□ 0.01
LRCH3-206ENST00000438796 THAP12O43422 761 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 INPP5BP32019 993 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 CDR2Q01850 454 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 BLIDQ8IZY5 108 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 INTS4Q96HW7 963 aaKnown RBP15.09■□□□□ 0.01
LRCH3-206ENST00000438796 RPRD2Q5VT52 1461 aaKnown RBP15.09■□□□□ 0.01
LRCH3-206ENST00000438796 ATP6V1E2Q96A05 226 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 RUFY4Q6ZNE9 571 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 MX2P20592 715 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 ZNF75DP51815 510 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 ARHGAP24Q8N264 748 aa15.09■□□□□ 0.01
LRCH3-206ENST00000438796 IPO11Q9UI26 975 aaKnown RBP15.09■□□□□ 0.01
LRCH3-206ENST00000438796 INPP1P49441 399 aa15.08■□□□□ 0.01
LRCH3-206ENST00000438796 CLNS1AP54105 237 aaKnown RBP15.08■□□□□ 0.01
LRCH3-206ENST00000438796 MCF2L2Q86YR7 1114 aa15.08■□□□□ 0.01
LRCH3-206ENST00000438796 RNF10Q8N5U6 811 aaKnown RBP15.08■□□□□ 0.01
LRCH3-206ENST00000438796 HAUS1Q96CS2 278 aa15.08■□□□□ 0.01
LRCH3-206ENST00000438796 PGBD1Q96JS3 809 aa15.08■□□□□ 0.01
LRCH3-206ENST00000438796 RAB17Q9H0T7 212 aa15.08■□□□□ 0.01
LRCH3-206ENST00000438796 BAG5Q9UL15 447 aa15.08■□□□□ 0.01
LRCH3-206ENST00000438796 KLRF2D3W0D1 207 aa15.08■□□□□ 0
LRCH3-206ENST00000438796 QTRT2Q9H974 415 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms