RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 ARHGAP39Q9C0H5 1083 aa17.18■□□□□ 0.34
CPNE1-215ENST00000437100 RAVER2Q9HCJ3 691 aaKnown RBP17.18■□□□□ 0.34
CPNE1-215ENST00000437100 STAT3P40763 770 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 CCNA1P78396 465 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 CD99L2Q8TCZ2 262 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 ERO1AQ96HE7 468 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 TRIM47Q96LD4 638 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 LARP6Q9BRS8 491 aaKnown RBP17.17■□□□□ 0.34
CPNE1-215ENST00000437100 EFCC1Q9HA90 598 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 PRDM10Q9NQV6 1147 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 CNTNAP5Q8WYK1 1306 aa17.17■□□□□ 0.34
CPNE1-215ENST00000437100 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 SLC25A27O95847 323 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 ERCC3P19447 782 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 MAPK4P31152 587 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 COPB2P35606 906 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
CPNE1-215ENST00000437100 NTRK3Q16288 839 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 QRICH1Q2TAL8 776 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 SNRNP48Q6IEG0 339 aaKnown RBP17.16■□□□□ 0.34
CPNE1-215ENST00000437100 AGBL1Q96MI9 1066 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 RIPK3Q9Y572 518 aa17.16■□□□□ 0.34
CPNE1-215ENST00000437100 COL11A1P12107 1806 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-215ENST00000437100 ZBTB5O15062 677 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 PFKFB2O60825 505 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 PPP1R11O60927 126 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-215ENST00000437100 LARGE1O95461 756 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 TAL1P17542 331 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-215ENST00000437100 PSMC4P43686 418 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 FCGRTP55899 365 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 SCRN1Q12765 414 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 ME3Q16798 604 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 TKFCQ3LXA3 575 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 CCDC174Q6PII3 467 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 CPXCR1Q8N123 301 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
CPNE1-215ENST00000437100 MROH8Q9H579 483 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 PNMA2Q9UL42 364 aa17.15■□□□□ 0.34
CPNE1-215ENST00000437100 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
CPNE1-215ENST00000437100 CCT2P78371 535 aaKnown RBP17.14■□□□□ 0.33
CPNE1-215ENST00000437100 ST3GAL1Q11201 340 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 PLS1Q14651 629 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 GPR142Q7Z601 462 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 CHST13Q8NET6 341 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 PIGSQ96S52 555 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 NCOA5Q9HCD5 579 aaKnown RBP17.14■□□□□ 0.33
CPNE1-215ENST00000437100 VAT1LQ9HCJ6 419 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 GJD2Q9UKL4 321 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 CCPG1Q9ULG6 757 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-215ENST00000437100 LIMCH1Q9UPQ0 1083 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 CTDP1Q9Y5B0 961 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-215ENST00000437100 ZSWIM8A7E2V4 1837 aa17.14■□□□□ 0.33
CPNE1-215ENST00000437100 PNMA6FA0A0J9YX94 578 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 GNRH1P01148 92 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 IFNAR1P17181 557 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 GRB14Q14449 540 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 KIF22Q14807 665 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 MORN1Q5T089 497 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 OTOP1Q7RTM1 612 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 PLEKHH3Q7Z736 793 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 ABRAQ8N0Z2 381 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 CLEC4DQ8WXI8 215 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 USP6NLQ92738 828 aa17.13■□□□□ 0.33
CPNE1-215ENST00000437100 TNPO2O14787 897 aaKnown RBP17.12■□□□□ 0.33
CPNE1-215ENST00000437100 DHX16O60231 1041 aaKnown RBP17.12■□□□□ 0.33
CPNE1-215ENST00000437100 ST18O60284 1047 aa17.12■□□□□ 0.33
CPNE1-215ENST00000437100 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
CPNE1-215ENST00000437100 HOMER1Q86YM7 354 aa17.12■□□□□ 0.33
CPNE1-215ENST00000437100 GTF3C6Q969F1 213 aa17.12■□□□□ 0.33
CPNE1-215ENST00000437100 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
CPNE1-215ENST00000437100 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
CPNE1-215ENST00000437100 SLKQ9H2G2 1235 aaPredicted RBP17.12■□□□□ 0.33
CPNE1-215ENST00000437100 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
CPNE1-215ENST00000437100 ZNF236Q9UL36 1845 aa17.12■□□□□ 0.33
CPNE1-215ENST00000437100 SLC15A5A6NIM6 579 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 FMNL1O95466 1100 aaPredicted RBP17.11■□□□□ 0.33
CPNE1-215ENST00000437100 PTPREP23469 700 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 STK3Q13188 491 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 MUM1L1Q5H9M0 696 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 NOL8Q76FK4 1167 aaKnown RBP17.11■□□□□ 0.33
CPNE1-215ENST00000437100 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 SOCS4Q8WXH5 440 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 TRERF1Q96PN7 1200 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 ACAD9Q9H845 621 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 FBXO40Q9UH90 709 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 ABCB11O95342 1321 aa17.11■□□□□ 0.33
CPNE1-215ENST00000437100 CASP8AP2Q9UKL3 1982 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 OPLAHO14841 1288 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 STRNO43815 780 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 CTDNEP1O95476 244 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 ALAS1P13196 640 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 GHRHRQ02643 423 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 PRKCZQ05513 592 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 ARHGEF6Q15052 776 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
CPNE1-215ENST00000437100 CCDC82Q8N4S0 544 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 NECAB1Q8N987 351 aa17.1■□□□□ 0.33
CPNE1-215ENST00000437100 COA7Q96BR5 231 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms