RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ERVK13-1Q9NX77 482 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 ZNF451Q9Y4E5 1061 aa8.09□□□□□ -1.11
HMGB3P5-201ENST00000428894 MYOCOSA0A1B0GUC4 107 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 OR14I1A6ND48 311 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 WTIPA6NIX2 430 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 PEX10O60683 326 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 GSTM1P09488 218 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 MED14OSP0DP75 135 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 HSF5Q4G112 596 aaPredicted RBP8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 RTP2Q5QGT7 225 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 GALNT18Q6P9A2 607 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 OR6P1Q8NGX9 317 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 SLC12A7Q9Y666 1083 aa8.08□□□□□ -1.12
HMGB3P5-201ENST00000428894 ITGA4P13612 1032 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 PNLIPP16233 465 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 KIR3DS1Q14943 382 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 TCEAL1Q15170 157 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 GNPTABQ3T906 1256 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 LRRC56Q8IYG6 542 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 FIBCD1Q8N539 461 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 ZSCAN18Q8TBC5 510 aaPredicted RBP8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 CPLX3Q8WVH0 158 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 SLC12A9Q9BXP2 914 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 TGIF2Q9GZN2 237 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 ACBD3Q9H3P7 528 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 SMG5Q9UPR3 1016 aaKnown RBP8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 FHOD1Q9Y613 1164 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 TAF6LQ9Y6J9 622 aa8.07□□□□□ -1.12
HMGB3P5-201ENST00000428894 NCAPD3P42695 1498 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 A0A1W2PQH9 124 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 NOP2P46087 812 aaKnown RBP8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 CEBPAP49715 358 aaPredicted RBP8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 KCNA10Q16322 511 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 SLCO6A1Q86UG4 719 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 C1QL4Q86Z23 238 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 TMEM52Q8NDY8 209 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 NOL6Q9H6R4 1146 aaKnown RBP8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 CD320Q9NPF0 282 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 PCDHB10Q9UN67 800 aa8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 SF3B6Q9Y3B4 125 aaKnown RBP8.06□□□□□ -1.12
HMGB3P5-201ENST00000428894 TEX51A0A1B0GUA7 166 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 A0A1W2PQ45 241 aaPredicted RBP8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 A0A1W2PQY0 241 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 SEMA7AO75326 666 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 SDHBP21912 280 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 DLG4P78352 724 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 PPP2R5EQ16537 467 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 NAT16Q8N8M0 369 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 C19orf47Q8N9M1 422 aaKnown RBP8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 SHDQ96IW2 340 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 SEC16BQ96JE7 1060 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 SGPP1Q9BX95 441 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 CCSER2Q9H7U1 834 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 PHAXQ9H814 394 aaKnown RBP8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 INPP5FQ9Y2H2 1132 aa8.05□□□□□ -1.12
HMGB3P5-201ENST00000428894 A0A087WZG4 1122 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 CBFA2T2O43439 604 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 PRKCAP17252 672 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 SRSF3P84103 164 aaKnown RBP8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 SLC7A5Q01650 507 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 PPP2R5DQ14738 602 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 HEATR6Q6AI08 1181 aaKnown RBP8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 NUP43Q8NFH3 380 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 ZDHHC15Q96MV8 337 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 JMJD8Q96S16 334 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 HAUS7Q99871 368 aa8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 DIS3Q9Y2L1 958 aaKnown RBP8.04□□□□□ -1.12
HMGB3P5-201ENST00000428894 ARL4AP40617 200 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 CYP4F8P98187 520 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 POU4F1Q01851 419 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 LAPTM5Q13571 262 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 HLA-DQA1Q5Y7H0 255 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 SPOCD1Q6ZMY3 1216 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 ADCY4Q8NFM4 1077 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 FCRL3Q96P31 734 aaPredicted RBP8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 WHRNQ9P202 907 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 ACSL6Q9UKU0 697 aa8.03□□□□□ -1.12
HMGB3P5-201ENST00000428894 KRTAP4-8A0A0G2JLE6 195 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 FGF10O15520 208 aaPredicted RBP8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 CD3EP07766 207 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 LINC00310P59036 64 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 ERVFRD-1P60508 538 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 ADAT2Q7Z6V5 191 aaKnown RBP8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 FGD4Q96M96 766 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 KLHL25Q9H0H3 589 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 GCM1Q9NP62 436 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 SIRT5Q9NXA8 310 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 IMPACTQ9P2X3 320 aa8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 CCDC9Q9Y3X0 531 aaKnown RBP8.02□□□□□ -1.13
HMGB3P5-201ENST00000428894 A0A1W2PQ27 194 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 A0A1W2PQ64 194 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 A0A1W2PQC6 194 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 A0A1W2PQD8 194 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 MPOP05164 745 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 ZSCAN22P10073 491 aaPredicted RBP8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 FBLN7Q53RD9 439 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 CIAPIN1Q6FI81 312 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 LCNL1Q6ZST4 164 aa8.01□□□□□ -1.13
HMGB3P5-201ENST00000428894 JAMLQ86YT9 394 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms