RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 REXO1Q8N1G1 1221 aaKnown RBP16.44■□□□□ 0.22
CDK3-201ENST00000425876 FAM200AQ8TCP9 573 aa16.44■□□□□ 0.22
CDK3-201ENST00000425876 RASGRP4Q8TDF6 673 aa16.44■□□□□ 0.22
CDK3-201ENST00000425876 PPP1R9BQ96SB3 815 aa16.44■□□□□ 0.22
CDK3-201ENST00000425876 SH2D4AQ9H788 454 aa16.44■□□□□ 0.22
CDK3-201ENST00000425876 KIAA1468Q9P260 1216 aa16.44■□□□□ 0.22
CDK3-201ENST00000425876 DICER1Q9UPY3 1922 aaKnown RBP16.44■□□□□ 0.22
CDK3-201ENST00000425876 LAD1O00515 517 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 SLC16A2P36021 539 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 ADCY7P51828 1080 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 SAMD7Q7Z3H4 446 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 C4orf32Q8N8J7 132 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 COA7Q96BR5 231 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 CSRNP2Q9H175 543 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 GOPCQ9HD26 462 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 RIC8AQ9NPQ8 531 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 PHF20L1A8MW92 1017 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 PPP1R11O60927 126 aaPredicted RBP16.43■□□□□ 0.22
CDK3-201ENST00000425876 GRIN1Q05586 938 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 STX1AQ16623 288 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 TBC1D10BQ4KMP7 808 aaPredicted RBP16.43■□□□□ 0.22
CDK3-201ENST00000425876 MIGA2Q7L4E1 593 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 HACL1Q9UJ83 578 aa16.43■□□□□ 0.22
CDK3-201ENST00000425876 PLA2G6O60733 806 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 MCM7P33993 719 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
CDK3-201ENST00000425876 INF2Q27J81 1249 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 QRICH1Q2TAL8 776 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 SYDE2Q5VT97 1194 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 KRBA2Q6ZNG9 492 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 APOBEC3FQ8IUX4 373 aaKnown RBP16.42■□□□□ 0.22
CDK3-201ENST00000425876 TEX2Q8IWB9 1127 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 HOOK2Q96ED9 719 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 ANO10Q9NW15 660 aa16.42■□□□□ 0.22
CDK3-201ENST00000425876 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
CDK3-201ENST00000425876 RAD21O60216 631 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 PRPHP41219 470 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 TRAF1Q13077 416 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 ANO6Q4KMQ2 910 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 KANK3Q6NY19 840 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 NEK8Q86SG6 692 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 CUL5Q93034 780 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 PYM1Q9BRP8 204 aaKnown RBP16.41■□□□□ 0.22
CDK3-201ENST00000425876 DEFB129Q9H1M3 183 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 VCPKMTQ9H867 229 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 USP25Q9UHP3 1055 aa16.41■□□□□ 0.22
CDK3-201ENST00000425876 TMEM232C9JQI7 657 aa16.4■□□□□ 0.22
CDK3-201ENST00000425876 LONP1P36776 959 aaKnown RBP16.4■□□□□ 0.22
CDK3-201ENST00000425876 ECE1P42892 770 aa16.4■□□□□ 0.22
CDK3-201ENST00000425876 CLK2P49760 499 aaKnown RBP16.4■□□□□ 0.22
CDK3-201ENST00000425876 CDC37Q16543 378 aaPredicted RBP16.4■□□□□ 0.22
CDK3-201ENST00000425876 MCTP2Q6DN12 878 aa16.4■□□□□ 0.22
CDK3-201ENST00000425876 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
CDK3-201ENST00000425876 TUBE1Q9UJT0 475 aa16.4■□□□□ 0.22
CDK3-201ENST00000425876 CTNND1O60716 968 aaKnown RBP16.39■□□□□ 0.21
CDK3-201ENST00000425876 LONRF3Q496Y0 759 aa16.39■□□□□ 0.21
CDK3-201ENST00000425876 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
CDK3-201ENST00000425876 DCAF15Q66K64 600 aa16.39■□□□□ 0.21
CDK3-201ENST00000425876 CCDC34Q96HJ3 373 aa16.39■□□□□ 0.21
CDK3-201ENST00000425876 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
CDK3-201ENST00000425876 AMNQ9BXJ7 453 aa16.39■□□□□ 0.21
CDK3-201ENST00000425876 BIN2Q9UBW5 565 aaPredicted RBP16.39■□□□□ 0.21
CDK3-201ENST00000425876 PCDHA1Q9Y5I3 950 aa16.39■□□□□ 0.21
CDK3-201ENST00000425876 PPP2R3BQ9Y5P8 575 aa16.39■□□□□ 0.21
CDK3-201ENST00000425876 VWA3AA6NCI4 1184 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
CDK3-201ENST00000425876 ZNF165P49910 485 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 STAT2P52630 851 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 MDM2Q00987 491 aaPredicted RBP16.38■□□□□ 0.21
CDK3-201ENST00000425876 JAKMIP3Q5VZ66 844 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 TBCKQ8TEA7 893 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
CDK3-201ENST00000425876 PSTPIP2Q9H939 334 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 CBX8Q9HC52 389 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 ASTN2O75129 1339 aaPredicted RBP16.38■□□□□ 0.21
CDK3-201ENST00000425876 IKQ13123 557 aaPredicted RBP16.38■□□□□ 0.21
CDK3-201ENST00000425876 ZRSR1Q15695 479 aaKnown RBP16.38■□□□□ 0.21
CDK3-201ENST00000425876 DTHD1Q6ZMT9 781 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 USP49Q70CQ1 688 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 DNAJC25Q9H1X3 360 aa16.38■□□□□ 0.21
CDK3-201ENST00000425876 ACTN4O43707 911 aaKnown RBP16.37■□□□□ 0.21
CDK3-201ENST00000425876 NLRP12P59046 1061 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 IL17AQ16552 155 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 LETM2Q2VYF4 491 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 KIAA1755Q5JYT7 1200 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 TRPM4Q8TD43 1214 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 EPSTI1Q96J88 318 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 NAP1L4Q99733 375 aaKnown RBP16.37■□□□□ 0.21
CDK3-201ENST00000425876 ZNF341Q9BYN7 854 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
CDK3-201ENST00000425876 TMEM60Q9H2L4 133 aa16.37■□□□□ 0.21
CDK3-201ENST00000425876 ZNF112Q9UJU3 913 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms