RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 C6orf222P0C671 652 aaPredicted RBP20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 FDX1P10109 184 aa20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 CDK7P50613 346 aa20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 CCDC144BQ3MJ40 725 aa20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 UPF3AQ9H1J1 476 aaKnown RBP20.1■□□□□ 0.81
UPF3AP3-201ENST00000420996 M0R2C6 588 aa20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 ADCY6O43306 1168 aa20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 GJA9P57773 515 aa20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 LRRFIP1Q32MZ4 808 aaKnown RBP20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 MFSD5Q6N075 450 aa20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 ARMCX2Q7L311 632 aa20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 LRRC47Q8N1G4 583 aaKnown RBP20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 NEDD1Q8NHV4 660 aa20.09■□□□□ 0.81
UPF3AP3-201ENST00000420996 PLIN4Q96Q06 1357 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 EYSQ5T1H1 3165 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 BMP3P12645 472 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 DNAJB2P25686 324 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 IRX5P78411 483 aaPredicted RBP20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 PPIGQ13427 754 aaKnown RBP eCLIP20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 GNASQ5JWF2 1037 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 TSHZ3Q63HK5 1081 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 SLFN13Q68D06 897 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 IFNL3Q8IZI9 196 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 VTI1AQ96AJ9 217 aa20.08■□□□□ 0.81
UPF3AP3-201ENST00000420996 A0A0U1RQG5 324 aaPredicted RBP20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 ARVCFO00192 962 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 TSPY3P0CV98 308 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 TSPY8P0CW00 308 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 PDE4BQ07343 736 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 CCDC174Q6PII3 467 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 CCDC144CPQ8IYA2 1237 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 NACAP1Q9BZK3 213 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 KATNBL1Q9H079 304 aa20.07■□□□□ 0.8
UPF3AP3-201ENST00000420996 TMEM232C9JQI7 657 aa20.06■□□□□ 0.8
UPF3AP3-201ENST00000420996 NKX3-2P78367 333 aa20.06■□□□□ 0.8
UPF3AP3-201ENST00000420996 GRIN2CQ14957 1233 aa20.06■□□□□ 0.8
UPF3AP3-201ENST00000420996 CHURC1Q8WUH1 139 aa20.06■□□□□ 0.8
UPF3AP3-201ENST00000420996 CTAGE5O15320 804 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 SLC3A2P08195 630 aaKnown RBP20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 STAT2P52630 851 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 TFAP4Q01664 338 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 CNTN2Q02246 1040 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 TMEM240Q5SV17 173 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 C16orf59Q7L2K0 433 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 FAM160B2Q86V87 743 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 FAM133AQ8N9E0 248 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 GMCL1Q96IK5 515 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 ZNF576Q9H609 170 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 ACAD9Q9H845 621 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 HOMER2Q9NSB8 354 aa20.05■□□□□ 0.8
UPF3AP3-201ENST00000420996 TTC41PQ6P2S7 1318 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 TLR3O15455 904 aaKnown RBP20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 TNFAIP2Q03169 654 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 TKFCQ3LXA3 575 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 FAM126BQ8IXS8 530 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 TMEM199Q8N511 208 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 STAG1Q8WVM7 1258 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 TIFAQ96CG3 184 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 SEC62Q99442 399 aaKnown RBP20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 NAPBQ9H115 298 aa20.04■□□□□ 0.8
UPF3AP3-201ENST00000420996 ZNF536O15090 1300 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 ASB14A6NK59 587 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 PLA2G6O60733 806 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 CSF2RAP15509 400 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 PPARAQ07869 468 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 PPP4R3BQ5MIZ7 849 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 RASIP1Q5U651 963 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 AGBL1Q96MI9 1066 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 A1CFQ9NQ94 594 aaKnown RBP20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 RNF146Q9NTX7 359 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 ISY1Q9ULR0 285 aaKnown RBP20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 CDH23Q9H251 3354 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 PRUNE2Q8WUY3 3088 aa20.03■□□□□ 0.8
UPF3AP3-201ENST00000420996 SOWAHBA6NEL2 793 aa20.02■□□□□ 0.8
UPF3AP3-201ENST00000420996 ERC2O15083 957 aa20.02■□□□□ 0.8
UPF3AP3-201ENST00000420996 SLC1A4P43007 532 aa20.02■□□□□ 0.8
UPF3AP3-201ENST00000420996 IKQ13123 557 aaPredicted RBP20.02■□□□□ 0.8
UPF3AP3-201ENST00000420996 ZMYM1Q5SVZ6 1142 aa20.02■□□□□ 0.8
UPF3AP3-201ENST00000420996 NOL8Q76FK4 1167 aaKnown RBP20.02■□□□□ 0.8
UPF3AP3-201ENST00000420996 SYMPKQ92797 1274 aaKnown RBP20.02■□□□□ 0.8
UPF3AP3-201ENST00000420996 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 CABYRO75952 493 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 CD4P01730 458 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 MCCP23508 829 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 BEX3Q00994 111 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 PSRC1Q6PGN9 363 aaPredicted RBP20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 CCDC129Q6ZRS4 1044 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 ZNF365Q70YC5 407 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 SLC43A3Q8NBI5 491 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 PI4K2BQ8TCG2 481 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 TRERF1Q96PN7 1200 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 PPP1R12CQ9BZL4 782 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 GNEQ9Y223 722 aaKnown RBP20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 ASTN1O14525 1302 aa20.01■□□□□ 0.79
UPF3AP3-201ENST00000420996 GRXCR1A8MXD5 290 aa20■□□□□ 0.79
UPF3AP3-201ENST00000420996 ALAS1P13196 640 aa20■□□□□ 0.79
UPF3AP3-201ENST00000420996 RCSD1Q6JBY9 416 aa20■□□□□ 0.79
UPF3AP3-201ENST00000420996 CXCL17Q6UXB2 119 aa20■□□□□ 0.79
UPF3AP3-201ENST00000420996 TLK2Q86UE8 772 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms