RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PNLIPP16233 465 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 ARID5AQ03989 594 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 PKN1Q16512 942 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 TNNI3KQ59H18 835 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 HLA-DQA1Q5Y7H0 255 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 KIAA1211LQ6NV74 962 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 VHLLQ6RSH7 139 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 ADAT2Q7Z6V5 191 aaKnown RBP5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 ARHGEF39Q8N4T4 335 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 FCRL3Q96P31 734 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 DIRC2Q96SL1 478 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 PPP1R16BQ96T49 567 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 EPB41L4BQ9H329 900 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 ZNF552Q9H707 407 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 AP5S1Q9NUS5 200 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 FAM86C1Q9NVL1 165 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 ERVK13-1Q9NX77 482 aa5.87□□□□□ -1.47
HMGB3P23-201ENST00000414981 ANKRD34BA5PLL1 514 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 PEX10O60683 326 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 USP2O75604 605 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 EPHX1P07099 455 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 CEBPAP49715 358 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 ZNF143P52747 638 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 NCAPHQ15003 741 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 SYDE1Q6ZW31 735 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 SLC26A8Q96RN1 970 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 GMLQ99445 158 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 APBA2Q99767 749 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 TINF2Q9BSI4 451 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 NOL6Q9H6R4 1146 aaKnown RBP5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 SUSD2Q9UGT4 822 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 ACSL6Q9UKU0 697 aa5.86□□□□□ -1.47
HMGB3P23-201ENST00000414981 DBX1A6NMT0 343 aa5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 FGF10O15520 208 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 LAPTM5Q13571 262 aa5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 HSF5Q4G112 596 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 SLCO6A1Q86UG4 719 aa5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 KCNN1Q92952 543 aa5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 PRKAG3Q9UGI9 489 aa5.85□□□□□ -1.47
HMGB3P23-201ENST00000414981 OR14I1A6ND48 311 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 HRKO00198 91 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 SMAD7O15105 426 aaKnown RBP5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 TBC1D8O95759 1140 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 EFEMP2O95967 443 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 FGRP09769 529 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 TMEM253P0C7T8 217 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 NAT2P11245 290 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 ETFBP38117 255 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 GRB10Q13322 594 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 PPP2R5DQ14738 602 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 CYP2R1Q6VVX0 501 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 SIRT2Q8IXJ6 389 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 ZNF513Q8N8E2 541 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 NLGN2Q8NFZ4 835 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 FGD4Q96M96 766 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 PLCD4Q9BRC7 762 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 GPR55Q9Y2T6 319 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 MRVI1Q9Y6F6 885 aa5.84□□□□□ -1.47
HMGB3P23-201ENST00000414981 AURKAO14965 403 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 TSPAN15O95858 294 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 MED14OSP0DP75 135 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 PDE6BP35913 854 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 ARL4AP40617 200 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 RAP1GAPP47736 663 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 ERVFRD-1P60508 538 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 ZNF124Q15973 351 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 EEF1DP3Q658K8 133 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 RCSD1Q6JBY9 416 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 NAT16Q8N8M0 369 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 ZDHHC15Q96MV8 337 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 PTCHD1Q96NR3 888 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 ACTR10Q9NZ32 417 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 TAF6LQ9Y6J9 622 aa5.83□□□□□ -1.48
HMGB3P23-201ENST00000414981 NFIBO00712 420 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 ABLIM1O14639 778 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 VAMP4O75379 141 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 KRT1P04264 644 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 CD3EP07766 207 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 PRKCAP17252 672 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 GLDCP23378 1020 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 YBX1P67809 324 aaKnown RBP5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 CYP4F8P98187 520 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 AMPD2Q01433 879 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 FZD5Q13467 585 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 FXNQ16595 210 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 POMZP3Q6PJE2 187 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 MCF2L2Q86YR7 1114 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 BVESQ8NE79 360 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 ADCY4Q8NFM4 1077 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 JMJD8Q96S16 334 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 KCNK12Q9HB15 430 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 CGGBP1Q9UFW8 167 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 AKT3Q9Y243 479 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 SUGT1Q9Y2Z0 365 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 EMC9Q9Y3B6 208 aa5.82□□□□□ -1.48
HMGB3P23-201ENST00000414981 TEX51A0A1B0GUA7 166 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 SEMA7AO75326 666 aa5.81□□□□□ -1.48
HMGB3P23-201ENST00000414981 MPOP05164 745 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms