RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 ANO1Q5XXA6 986 aa23.08■■□□□ 1.29
TSPAN4-209ENST00000409543 DGKHQ86XP1 1220 aa23.08■■□□□ 1.29
TSPAN4-209ENST00000409543 HOMER2Q9NSB8 354 aa23.08■■□□□ 1.29
TSPAN4-209ENST00000409543 CNPY2Q9Y2B0 182 aa23.08■■□□□ 1.29
TSPAN4-209ENST00000409543 ZNF865P0CJ78 1059 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 PDHBP11177 359 aa23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 CCDC178Q5BJE1 867 aa23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 GJC2Q5T442 439 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 TTBK2Q6IQ55 1244 aa23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 CCDC174Q6PII3 467 aa23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 RUFY2Q8WXA3 655 aa23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 SENP6Q9GZR1 1112 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 PRO3102Q9H379 93 aa23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 RNF146Q9NTX7 359 aa23.07■■□□□ 1.28
TSPAN4-209ENST00000409543 KDM4AO75164 1064 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 CHMLP26374 656 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 SLC16A2P36021 539 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 SNAP25P60880 206 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 LRRC26Q2I0M4 334 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 SYDE2Q5VT97 1194 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 IQCA1Q86XH1 822 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 TRERF1Q96PN7 1200 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 ZKSCAN3Q9BRR0 538 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 RANBP17Q9H2T7 1088 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 GPCPD1Q9NPB8 672 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 RBM27Q9P2N5 1060 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 SMCHD1A6NHR9 2005 aa23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 FRMPD2Q68DX3 1309 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-209ENST00000409543 KBTBD13C9JR72 458 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 SNAI1O95863 264 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 ICAM1P05362 532 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 SNHG28P0DPA3 235 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 RARBP10826 455 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 ALAS1P13196 640 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 ANKS1AQ92625 1134 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 FGD4Q96M96 766 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 KRT23Q9C075 422 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 CNNM2Q9H8M5 875 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 A1CFQ9NQ94 594 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 ZSWIM5Q9P217 1185 aa23.05■■□□□ 1.28
TSPAN4-209ENST00000409543 TRIOBPQ9H2D6 2365 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 B4E1Z4 1266 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 AKR1A1P14550 325 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 ZNF543Q08ER8 600 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 LRRC41Q15345 812 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 FAM133AQ8N9E0 248 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 XPNPEP3Q9NQH7 507 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 CCPG1Q9ULG6 757 aa23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 ZMYND8Q9ULU4 1186 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-209ENST00000409543 POTEB2H3BUK9 544 aa23.03■■□□□ 1.28
TSPAN4-209ENST00000409543 CNTN2Q02246 1040 aa23.03■■□□□ 1.28
TSPAN4-209ENST00000409543 ZSCAN10Q96SZ4 725 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-209ENST00000409543 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.03■■□□□ 1.28
TSPAN4-209ENST00000409543 FAM184BQ9ULE4 1060 aa23.03■■□□□ 1.28
TSPAN4-209ENST00000409543 MYCNP04198 464 aaPredicted RBP23.02■■□□□ 1.28
TSPAN4-209ENST00000409543 MUM1L1Q5H9M0 696 aa23.02■■□□□ 1.28
TSPAN4-209ENST00000409543 ABHD16BQ9H3Z7 469 aa23.02■■□□□ 1.28
TSPAN4-209ENST00000409543 PNMA2Q9UL42 364 aa23.02■■□□□ 1.28
TSPAN4-209ENST00000409543 FXR1P51114 621 aaKnown RBP eCLIP23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 ACVR2BQ13705 512 aa23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 GPATCH4Q5T3I0 446 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 ARMCX2Q7L311 632 aa23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 RNF180Q86T96 592 aa23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 PNMA1Q8ND90 353 aa23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 KAT14Q9H8E8 782 aa23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 ZHX1Q9UKY1 873 aaPredicted RBP23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 RANBP2P49792 3224 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-209ENST00000409543 SOWAHBA6NEL2 793 aa23■■□□□ 1.27
TSPAN4-209ENST00000409543 SYN1P17600 705 aa23■■□□□ 1.27
TSPAN4-209ENST00000409543 ATN1P54259 1190 aaPredicted RBP23■■□□□ 1.27
TSPAN4-209ENST00000409543 PTH1RQ03431 593 aa23■■□□□ 1.27
TSPAN4-209ENST00000409543 SLC39A5Q6ZMH5 540 aa23■■□□□ 1.27
TSPAN4-209ENST00000409543 CCDC144CPQ8IYA2 1237 aa23■■□□□ 1.27
TSPAN4-209ENST00000409543 ENAHQ8N8S7 591 aaPredicted RBP23■■□□□ 1.27
TSPAN4-209ENST00000409543 GDF15Q99988 308 aa23■■□□□ 1.27
TSPAN4-209ENST00000409543 CYP39A1Q9NYL5 469 aa23■■□□□ 1.27
TSPAN4-209ENST00000409543 DNAH12Q6ZR08 3092 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 A0A1W2PPC1 479 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 SGSM2O43147 1006 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 PGK1P00558 417 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 BMP8BP34820 402 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 ADCYAP1R1P41586 468 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 UBAC1Q9BSL1 405 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 PHF24Q9UPV7 400 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 U3KPZ7 1027 aaPredicted RBP22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 TNKSO95271 1327 aa22.99■■□□□ 1.27
TSPAN4-209ENST00000409543 MCM3APO60318 1980 aa22.98■■□□□ 1.27
TSPAN4-209ENST00000409543 ASB14A6NK59 587 aa22.98■■□□□ 1.27
TSPAN4-209ENST00000409543 ADAMTS4O75173 837 aa22.98■■□□□ 1.27
TSPAN4-209ENST00000409543 DUSP11O75319 330 aaKnown RBP22.98■■□□□ 1.27
TSPAN4-209ENST00000409543 NSMFQ6X4W1 530 aa22.98■■□□□ 1.27
TSPAN4-209ENST00000409543 LENG1Q96BZ8 264 aaPredicted RBP22.98■■□□□ 1.27
TSPAN4-209ENST00000409543 KATNBL1Q9H079 304 aa22.98■■□□□ 1.27
TSPAN4-209ENST00000409543 CYP21A2P08686 494 aa22.97■■□□□ 1.27
TSPAN4-209ENST00000409543 GOLGA8HP0CJ92 632 aa22.97■■□□□ 1.27
TSPAN4-209ENST00000409543 RTP1P59025 263 aa22.97■■□□□ 1.27
TSPAN4-209ENST00000409543 SNX17Q15036 470 aa22.97■■□□□ 1.27
TSPAN4-209ENST00000409543 CCDC144BQ3MJ40 725 aa22.97■■□□□ 1.27
TSPAN4-209ENST00000409543 FERMT2Q96AC1 680 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms