RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TMED1Q13445 227 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SOGA3Q5TF21 947 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 MORC4Q8TE76 937 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SMC6Q96SB8 1091 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SLC26A6Q9BXS9 759 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 OSBPL5Q9H0X9 879 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SUGCTQ9HAC7 445 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 ABCF2Q9UG63 623 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 ZBTB1Q9Y2K1 713 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 DDX60LQ5H9U9 1706 aaKnown RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 TXNDC9O14530 226 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 ZNF213O14771 459 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 OPHN1O60890 802 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 METAP2P50579 478 aaKnown RBP eCLIP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 IRAK1P51617 712 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 NDUFA8P51970 172 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 ZNF131P52739 623 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SH3BGRP55822 239 aaPredicted RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SF3B3Q15393 1217 aaKnown RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 MCUR1Q96AQ8 359 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 ZMAT2Q96NC0 199 aaKnown RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 CHCHD3Q9NX63 227 aaKnown RBP6.49□□□□□ -1.37
HDAC9-203ENST00000406072 NKIRAS1Q9NYS0 192 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 PCDHA7Q9UN72 937 aa6.49□□□□□ -1.37
HDAC9-203ENST00000406072 SLC27A2O14975 620 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 CEP104O60308 925 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 SNUPNO95149 360 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 FGFR1OPO95684 399 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 NBPF7P0C2Y1 421 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 KRT13P13646 458 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 PSMC4P43686 418 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 MAP7D1Q3KQU3 841 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 CFAP221Q4G0U5 840 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 DHX32Q7L7V1 743 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 GPIHBP1Q8IV16 184 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 MGARPQ8TDB4 240 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 MIEF2Q96C03 454 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 NYXQ9GZU5 481 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 HAUS4Q9H6D7 363 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 L2HGDHQ9H9P8 463 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 ZNF446Q9NWS9 450 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 FOCADQ5VW36 1801 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 UBN2Q6ZU65 1347 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 SOWAHDA6NJG2 315 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 PSMA7O14818 248 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 POLR2DO15514 142 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 A1BGP04217 495 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 IFNAR2P48551 515 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 APBA1Q02410 837 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 GUCY2DQ02846 1103 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 TBC1D8BQ0IIM8 1120 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 CUL3Q13618 768 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 IFI16Q16666 785 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 CCDC57Q2TAC2 916 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 NBPF20Q3BBV1 942 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 TTLL7Q6ZT98 887 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 C15orf52Q6ZUT6 534 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 KRI1Q8N9T8 703 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 CCHCR1Q8TD31 782 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 TM6SF1Q9BZW5 370 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 TSGA10Q9BZW7 698 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 TAB2Q9NYJ8 693 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 MAPK8IP1Q9UQF2 711 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 SNED1Q8TER0 1413 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 H3BQF6 201 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 CTNND1O60716 968 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 PFKFB1P16118 471 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 EPHB4P54760 987 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 MRPS25P82663 173 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 TRIM14Q14142 442 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 SPTY2D1Q68D10 685 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 NAA16Q6N069 864 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 ARMCX5Q6P1M9 558 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 HOOK3Q86VS8 718 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 EGFL6Q8IUX8 553 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 VPS52Q8N1B4 723 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 KCNV2Q8TDN2 545 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 RAB3IPQ96QF0 476 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 MYD88Q99836 296 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 CCDC77Q9BR77 488 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 POLD4Q9HCU8 107 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 BMP2KQ9NSY1 1161 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 EPN1Q9Y6I3 576 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 MYH13Q9UKX3 1938 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 COL4A1P02462 1669 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 RASSF10A6NK89 507 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 ZPR1O75312 459 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 AP1G2O75843 785 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 ZNF827Q17R98 1081 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 SWT1Q5T5J6 900 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 DZIP3Q86Y13 1208 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 GSPT2Q8IYD1 628 aaKnown RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 SPDYE1Q8NFV5 336 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 OR8K1Q8NGG5 319 aa6.48□□□□□ -1.37
HDAC9-203ENST00000406072 IRX2Q9BZI1 471 aaPredicted RBP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 FTOQ9C0B1 505 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC9-203ENST00000406072 KLHL14Q9P2G3 628 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms