RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 GRAPQ13588 217 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 NR1I3Q14994 352 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 SMAP1Q8IYB5 467 aaPredicted RBP4.91□□□□□ -1.62
SMC6-203ENST00000402989 KRT222Q8N1A0 295 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 SLC35F6Q8N357 371 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 GRAPLQ8TC17 118 aaPredicted RBP4.91□□□□□ -1.62
SMC6-203ENST00000402989 CDK5RAP3Q96JB5 506 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 ZFP91Q96JP5 570 aaPredicted RBP4.91□□□□□ -1.62
SMC6-203ENST00000402989 CHP1Q99653 195 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 CD209Q9NNX6 404 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 SLC39A2Q9NP94 309 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 ZNF446Q9NWS9 450 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 MAD2L2Q9UI95 211 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 PCDHA6Q9UN73 950 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 PCDHA8Q9Y5H6 950 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 PARP3Q9Y6F1 533 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 DUOX1Q9NRD9 1551 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 MYH8P13535 1937 aa4.91□□□□□ -1.62
SMC6-203ENST00000402989 A0A1B0GTH6 734 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 GTPBP6O43824 516 aaPredicted RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 TRIM37O94972 964 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 GYPCP04921 128 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 SERPINB2P05120 415 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 FCER1AP12319 257 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TAL1P17542 331 aaPredicted RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 ERCC5P28715 1186 aaPredicted RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 LRRC41Q15345 812 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TXNRD1Q16881 649 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TSR1Q2NL82 804 aaKnown RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 PRR5LQ6MZQ0 368 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 CABP7Q86V35 215 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TNFRSF25Q93038 417 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 GDAP1L1Q96MZ0 367 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 GSDMAQ96QA5 445 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 PSMB7Q99436 277 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TANGO6Q9C0B7 1094 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 LRRC4BQ9NT99 713 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TCP11L1Q9NUJ3 509 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 EXOC1Q9NV70 894 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 ADD3Q9UEY8 706 aaKnown RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 CACNA1SQ13698 1873 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 POTEMA6NI47 508 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 STX10O60499 249 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 BMP15O95972 392 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 LDHCP07864 332 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TRIM21P19474 475 aaKnown RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 TM4SF1P30408 202 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 GSTO1P78417 241 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 MRPS25P82663 173 aaKnown RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 PPP2R5BQ15173 497 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 SHROOM1Q2M3G4 852 aaPredicted RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 FKBP15Q5T1M5 1219 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 KCTD1Q719H9 257 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 CSGALNACT2Q8N6G5 542 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TRIML1Q8N9V2 468 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 TBCKQ8TEA7 893 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 RRP36Q96EU6 259 aaKnown RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 ZCCHC17Q9NP64 241 aaKnown RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 DISC1Q9NRI5 854 aa4.9□□□□□ -1.62
SMC6-203ENST00000402989 ARGLU1Q9NWB6 273 aaPredicted RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 DDX41Q9UJV9 622 aaKnown RBP4.9□□□□□ -1.62
SMC6-203ENST00000402989 TAF1LQ8IZX4 1826 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 DOCK2Q92608 1830 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 BCL9LQ86UU0 1499 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 STXBP3O00186 592 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 SEMA3EO15041 775 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 MFAP3LO75121 409 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 TDP2O95551 362 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 ST5P78524 1137 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 TBX2Q13207 712 aaPredicted RBP4.9□□□□□ -1.63
SMC6-203ENST00000402989 STIM1Q13586 685 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 MCM6Q14566 821 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 SKIDA1Q1XH10 827 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 TTBK2Q6IQ55 1244 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 PDXDC2PQ6P474 469 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 BARGINQ6ZT62 677 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 KIAA1328Q86T90 577 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 CCDC148Q8NFR7 591 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 ZNF622Q969S3 477 aaKnown RBP eCLIP4.9□□□□□ -1.633e-7■■■□□ 19.1
SMC6-203ENST00000402989 PLEKHA4Q9H4M7 779 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 KANSL2Q9H9L4 492 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 ADGRG1Q9Y653 693 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 LRP5O75197 1615 aa4.9□□□□□ -1.63
SMC6-203ENST00000402989 MACROD2A1Z1Q3 448 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 PSMA7O14818 248 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 NKRFO15226 690 aaKnown RBP eCLIP4.89□□□□□ -1.635e-6■□□□□ 8.5
SMC6-203ENST00000402989 PHACTR2O75167 634 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 AKR1B1P15121 316 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 ERVK-24P63145 666 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 CYP27A1Q02318 531 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 GRM4Q14833 912 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 NONOQ15233 471 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMC6-203ENST00000402989 TCP11X2Q5H9J9 407 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 SLC10A5Q5PT55 438 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 NCAPH2Q6IBW4 605 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 TRMT1LQ7Z2T5 733 aaKnown RBP4.89□□□□□ -1.63
SMC6-203ENST00000402989 DBNDD1Q9H9R9 158 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 FAM207AQ9NSI2 230 aaPredicted RBP4.89□□□□□ -1.63
SMC6-203ENST00000402989 HDAC6Q9UBN7 1215 aa4.89□□□□□ -1.63
SMC6-203ENST00000402989 POLLQ9UGP5 575 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms