RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 PRPF38AQ8NAV1 312 aaKnown RBP16■□□□□ 0.15
GABPA-202ENST00000400075 UBXN4Q92575 508 aa16■□□□□ 0.15
GABPA-202ENST00000400075 MAP4K1Q92918 833 aa16■□□□□ 0.15
GABPA-202ENST00000400075 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
GABPA-202ENST00000400075 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
GABPA-202ENST00000400075 JADE2Q9NQC1 790 aa16■□□□□ 0.15
GABPA-202ENST00000400075 RNF146Q9NTX7 359 aa16■□□□□ 0.15
GABPA-202ENST00000400075 RIPOR2Q9Y4F9 1068 aa16■□□□□ 0.15
GABPA-202ENST00000400075 E9PCH4 1651 aa16■□□□□ 0.15
GABPA-202ENST00000400075 UTYO14607 1347 aa16■□□□□ 0.15
GABPA-202ENST00000400075 ZBBXA8MT70 800 aa16■□□□□ 0.15
GABPA-202ENST00000400075 CYP21A2P08686 494 aa16■□□□□ 0.15
GABPA-202ENST00000400075 FDX1P10109 184 aa16■□□□□ 0.15
GABPA-202ENST00000400075 GNAT1P11488 350 aa16■□□□□ 0.15
GABPA-202ENST00000400075 SREBF2Q12772 1141 aa16■□□□□ 0.15
GABPA-202ENST00000400075 FEM1BQ9UK73 627 aa16■□□□□ 0.15
GABPA-202ENST00000400075 MRPS9P82933 396 aaKnown RBP15.99■□□□□ 0.15
GABPA-202ENST00000400075 STXBP2Q15833 593 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 NACC1Q96RE7 527 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 BTBD18B2RXH4 712 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 PLSCR1O15162 318 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 TNNC2P02585 160 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 STAT3P40763 770 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.15
GABPA-202ENST00000400075 PARK7Q99497 189 aaKnown RBP15.99■□□□□ 0.15
GABPA-202ENST00000400075 RAVER2Q9HCJ3 691 aaKnown RBP15.99■□□□□ 0.15
GABPA-202ENST00000400075 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 GCFC2P16383 781 aaKnown RBP15.99■□□□□ 0.15
GABPA-202ENST00000400075 YWHAEP62258 255 aaKnown RBP15.99■□□□□ 0.15
GABPA-202ENST00000400075 BIRC2Q13490 618 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 ODR4Q5SWX8 454 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 DCAF4Q8WV16 495 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 LUC7L2Q9Y383 392 aaKnown RBP15.99■□□□□ 0.15
GABPA-202ENST00000400075 COL4A3BPQ9Y5P4 624 aa15.99■□□□□ 0.15
GABPA-202ENST00000400075 ELMSAN1Q6PJG2 1045 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 RMDN3Q96TC7 470 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 PARP2Q9UGN5 583 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.98■□□□□ 0.15
GABPA-202ENST00000400075 TMEM191BP0C7N4 346 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 PRAMEF18Q5VWM3 479 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 AGBL3Q8NEM8 1001 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 STAMQ92783 540 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 CEP170P1Q96L14 293 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 RIOK1Q9BRS2 568 aaKnown RBP15.98■□□□□ 0.15
GABPA-202ENST00000400075 TMEM110-MUSTN1A8MSY1 372 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 K7ENM7 598 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 NTSR2O95665 410 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 CASQ1P31415 396 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 KRT9P35527 623 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 MYSM1Q5VVJ2 828 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 ANKRD13AQ8IZ07 590 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 FAM49AQ9H0Q0 323 aaPredicted RBP15.98■□□□□ 0.15
GABPA-202ENST00000400075 MYOZ2Q9NPC6 264 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 ZSWIM5Q9P217 1185 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 DTNBO60941 627 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 CYP2D6P10635 497 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 GSPT1P15170 499 aaKnown RBP15.98■□□□□ 0.15
GABPA-202ENST00000400075 FAM193AP78312 1265 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 CCDC50Q8IVM0 306 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 CCDC113Q9H0I3 377 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 DEFB129Q9H1M3 183 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 MTIF3Q9H2K0 278 aaKnown RBP15.98■□□□□ 0.15
GABPA-202ENST00000400075 TRMT1Q9NXH9 659 aaKnown RBP15.98■□□□□ 0.15
GABPA-202ENST00000400075 LAMC1P11047 1609 aa15.98■□□□□ 0.15
GABPA-202ENST00000400075 PFKFB2O60825 505 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 MTX1Q13505 466 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 MMS19Q96T76 1030 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 CCL15-CCL14A0A0B4J2E2 113 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 DAPK3O43293 454 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 EPHX2P34913 555 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 CCL15Q16663 113 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 KIF18AQ8NI77 898 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 TSNARE1Q96NA8 513 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 DCP1AQ9NPI6 582 aaPredicted RBP15.97■□□□□ 0.15
GABPA-202ENST00000400075 TNFAIP3P21580 790 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 ZNF589Q86UQ0 364 aaPredicted RBP15.97■□□□□ 0.15
GABPA-202ENST00000400075 NLRP7Q8WX94 980 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 PNMA6FA0A0J9YX94 578 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 F5H6K3 240 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 KLRC3Q07444 240 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 ME3Q16798 604 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 KMT5BQ4FZB7 885 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 TRMT2AQ8IZ69 625 aaKnown RBP15.97■□□□□ 0.15
GABPA-202ENST00000400075 NSUN6Q8TEA1 469 aaKnown RBP15.97■□□□□ 0.15
GABPA-202ENST00000400075 MMP19Q99542 508 aa15.97■□□□□ 0.15
GABPA-202ENST00000400075 ZNF70Q9UC06 446 aaPredicted RBP15.97■□□□□ 0.15
GABPA-202ENST00000400075 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 IFFO1Q0D2I5 559 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 SLC44A5Q8NCS7 719 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 MED10Q9BTT4 135 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.15
GABPA-202ENST00000400075 ZC3H13Q5T200 1668 aaKnown RBP15.96■□□□□ 0.15
GABPA-202ENST00000400075 PDIA3P30101 505 aaKnown RBP15.96■□□□□ 0.15
GABPA-202ENST00000400075 CYP2J2P51589 502 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 KIF5AQ12840 1032 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 PLA2G12BQ9BX93 195 aa15.96■□□□□ 0.15
GABPA-202ENST00000400075 MAK16Q9BXY0 300 aaKnown RBP15.96■□□□□ 0.15
GABPA-202ENST00000400075 ANKFY1Q9P2R3 1169 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms