RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PLS1Q14651 629 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 SAMD1Q6SPF0 538 aaPredicted RBP20.56■□□□□ 0.88
CTNS-203ENST00000399306 GPR142Q7Z601 462 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 ADGRF4Q8IZF3 695 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 STAG2Q8N3U4 1231 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 NUP133Q8WUM0 1156 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 BRF1Q92994 677 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 ARHGAP39Q9C0H5 1083 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
CTNS-203ENST00000399306 MYH6P13533 1939 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 KLF18A0A0U1RQI7 1052 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 CCDC196A0A1B0GTZ2 297 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 ERCC3P19447 782 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 PTPREP23469 700 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 SNRNP48Q6IEG0 339 aaKnown RBP20.55■□□□□ 0.88
CTNS-203ENST00000399306 FBXO46Q6PJ61 603 aaPredicted RBP20.55■□□□□ 0.88
CTNS-203ENST00000399306 ZNF274Q96GC6 653 aaPredicted RBP20.55■□□□□ 0.88
CTNS-203ENST00000399306 UPF3BQ9BZI7 483 aaKnown RBP20.55■□□□□ 0.88
CTNS-203ENST00000399306 UBA5Q9GZZ9 404 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 GJD2Q9UKL4 321 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 BRPF3Q9ULD4 1205 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 PTPN22Q9Y2R2 807 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 IVNS1ABPQ9Y6Y0 642 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 ZSWIM8A7E2V4 1837 aa20.55■□□□□ 0.88
CTNS-203ENST00000399306 PEX10O60683 326 aa20.54■□□□□ 0.88
CTNS-203ENST00000399306 XRCC5P13010 732 aaKnown RBP20.54■□□□□ 0.88
CTNS-203ENST00000399306 TOB2Q14106 344 aaPredicted RBP20.54■□□□□ 0.88
CTNS-203ENST00000399306 GRB14Q14449 540 aa20.54■□□□□ 0.88
CTNS-203ENST00000399306 MORN1Q5T089 497 aa20.54■□□□□ 0.88
CTNS-203ENST00000399306 USP6NLQ92738 828 aa20.54■□□□□ 0.88
CTNS-203ENST00000399306 NUDT12Q9BQG2 462 aa20.54■□□□□ 0.88
CTNS-203ENST00000399306 JMJD4Q9H9V9 463 aa20.54■□□□□ 0.88
CTNS-203ENST00000399306 CWC22Q9HCG8 908 aaKnown RBP20.54■□□□□ 0.88
CTNS-203ENST00000399306 RAVER2Q9HCJ3 691 aaKnown RBP20.54■□□□□ 0.88
CTNS-203ENST00000399306 PLXNB2O15031 1838 aa20.54■□□□□ 0.88
CTNS-203ENST00000399306 ZNFX1Q9P2E3 1918 aaKnown RBP20.53■□□□□ 0.88
CTNS-203ENST00000399306 HOXC6P09630 235 aa20.53■□□□□ 0.88
CTNS-203ENST00000399306 MICU3Q86XE3 530 aa20.53■□□□□ 0.88
CTNS-203ENST00000399306 NCAPG2Q86XI2 1143 aa20.53■□□□□ 0.88
CTNS-203ENST00000399306 TRMT44Q8IYL2 757 aaKnown RBP20.53■□□□□ 0.88
CTNS-203ENST00000399306 CPXCR1Q8N123 301 aa20.53■□□□□ 0.88
CTNS-203ENST00000399306 CHMP4CQ96CF2 233 aa20.53■□□□□ 0.88
CTNS-203ENST00000399306 BAZ2BQ9UIF8 2168 aaKnown RBP20.53■□□□□ 0.88
CTNS-203ENST00000399306 ZBTB5O15062 677 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 FCER1AP12319 257 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 APOBRQ0VD83 1088 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 CDC37Q16543 378 aaPredicted RBP20.52■□□□□ 0.88
CTNS-203ENST00000399306 RTN1Q16799 776 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 TMTC3Q6ZXV5 915 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 PXYLP1Q8TE99 480 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 TBC1D32Q96NH3 1257 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 MYL10Q9BUA6 226 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 ACAD9Q9H845 621 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 SLC5A4Q9NY91 659 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 CCPG1Q9ULG6 757 aa20.52■□□□□ 0.88
CTNS-203ENST00000399306 CYTH3O43739 400 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 RGS2P41220 211 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 FLT3LGP49771 235 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 METAP2P50579 478 aaKnown RBP eCLIP20.51■□□□□ 0.87
CTNS-203ENST00000399306 MAP2K5Q13163 448 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 AGBL1Q96MI9 1066 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 KIF2CQ99661 725 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 RIPK3Q9Y572 518 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 SMCHD1A6NHR9 2005 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 ABCB11O95342 1321 aa20.51■□□□□ 0.87
CTNS-203ENST00000399306 PNMA6FA0A0J9YX94 578 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 GOLGA8AA7E2F4 631 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 GOLGA8BA8MQT2 603 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 DHX16O60231 1041 aaKnown RBP20.5■□□□□ 0.87
CTNS-203ENST00000399306 PDIA3P30101 505 aaKnown RBP20.5■□□□□ 0.87
CTNS-203ENST00000399306 PRKCZQ05513 592 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 KCTD2Q14681 263 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 QRICH1Q2TAL8 776 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 CCDC174Q6PII3 467 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 SRBD1Q8N5C6 995 aaKnown RBP20.5■□□□□ 0.87
CTNS-203ENST00000399306 SAMD3Q8N6K7 520 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 SLAIN1Q8ND83 568 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 RGS22Q8NE09 1264 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 RAET1EQ8TD07 263 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 AMNQ9BXJ7 453 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 RNF146Q9NTX7 359 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 HPS5Q9UPZ3 1129 aa20.5■□□□□ 0.87
CTNS-203ENST00000399306 DIS3Q9Y2L1 958 aaKnown RBP20.5■□□□□ 0.87
CTNS-203ENST00000399306 NEK4P51957 841 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 RABEP1Q15276 862 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 SLC35G1Q2M3R5 365 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 COL13A1Q5TAT6 717 aaPredicted RBP20.49■□□□□ 0.87
CTNS-203ENST00000399306 WDR78Q5VTH9 848 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 NBPF11Q86T75 865 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 FBXO11Q86XK2 927 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 RRP36Q96EU6 259 aaKnown RBP20.49■□□□□ 0.87
CTNS-203ENST00000399306 TRERF1Q96PN7 1200 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 MMP19Q99542 508 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 APBA2Q99767 749 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 MCOLN1Q9GZU1 580 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 CPVLQ9H3G5 476 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 FAM217BQ9NTX9 383 aaPredicted RBP20.49■□□□□ 0.87
CTNS-203ENST00000399306 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
CTNS-203ENST00000399306 GABRQQ9UN88 632 aa20.49■□□□□ 0.87
CTNS-203ENST00000399306 PFASO15067 1338 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms